Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00497 ATGGCCACCGATGCCCGTGACTCGCGTCGCAAGCATCGCCGATCATCCTCTCCGGAGGACGTGGACAGATCCTCGAAGCGCCACAAGCACCGCCACCGCCACGGGAGCAAAAAGCGCGACGAAGAGATTGAATTCGATGATCGAACAATTGCTGCGGTTCCTTCTCCAACTCCGCACAGACATCTTCCTGACGACGATGTGGAGGAGGGAGAGATCCTCGAAGACGAGGCTCTCGACGGCGAGGTTGGAAAAAAGGAGACGGAATCTGATGTCGAACCTGGTGAAATCAAGGTGACAGGAGATCGAGATGTTCGATCTGATAATCAAAATTCGGGACACCTCACTAAAAATTCAGAAACTAGAAACGAGGACATTAGGGATGATAAATTTATTAGTCCTGCAATTGATGCAGAAGATGATGTCTCTCCTAATCGCTCAAGTGCCGAGACTCGAGATGGAAAGCATGCTCAAGCTCATACAGATGGTGTGGGCAATGGTTATTTGGATCCTAAATCTTCCAAAGGGGATAAGTGGCAGAATGGGGAACTTGGACATTTTAAAGGGAATGAGAAACTAAAAGGTGACTTTGATGACGAAACACTGGAGGCTAATGCGAGGAAAGCATATTACCATAGGAATTCATCCTCCGAAAGTGGAGGAGAAAAATATAGAATATCAGGAAGTTCTCCTTCTCATGGTAGATATAGAAGTCGATCAAGATCAATTGGTCATACTAGAGACAGGTCTCGTTCTCGTAGTATCATAGATGAATATGCTCATTCCAAGAGAAGGCGCTCTGACTATGACCATGATGAGGAAAGAGTGAGGGAACGTGGAAGGGAGCATGGTCATGGCAATGTGGTAGATGATAGAAGGGAATACAGTACCAGATATCACAGTCGAGAGGCCCGGGATAGAGATAGGAGTAGGGATAGAGATGTGGATAGAGACTTACACAGAGAAAAGAAACAAGAGGAAACAATCAGGGGTAAAGAGATTGAGTGGGAACACAAAAGGGGAAAGGAACGTGAAAGGAGCCGTGAGAGGTATAGAAGGGATGTAGAAAAAGATAGGAGCAGGGAAAGGGAGGAGGATAGGGGCAGGAGACAAGAAAAGGAAAGAGATAGGAGCTGGGATACAGTGTTTGAGAGGGATTGGAGAAGGGAAAAGGAAAGAGATAGAAGTAGGGACAGAACAAGAGGTGGCAAGAGAGATAGAGACCTGGAGAATGAAAGGGATGATAAGAATCGGGAAAGAGATAATATTAAGGAGAGGGAAAGGCGAGATGATAGATATAAGCACAAAGATAGAGACAATGCAAATGGTAAGGATAGGCATCTGCGTCATGAGGATGGTAATGACAATGGAGATAGATATAGGAAACATTCAAGGCATGAAGAAAATGAATACCATTGGGAAAGAAAAAGAAATTCTGATAATCCTGTAAAGGTTTATAACTCAATGGGAATTACTGCTGAAGTGGATGAAAGCAAACTAATAAGCAGTGAGGTTGAACCTGATGACTTAGAGGAGGATACATTGCAATTACCTGAGCAAGAAGAGGAAGATCTCAACAGGATCAAAGAAGAGAGTAGAAGAAGAAGGGAAGCAATAATGAAGAAATACAAGAAGCAGCATCAGCAAGTAGAAGAAGCAGTTGGAAATGAAGGAAAAGACAAGGATGCAGACATTGCTACTGACATCTCTGAAGCACGTGATGATAAGAATGGTGATACTGATTATGTGGAGCAGTCATTTGCTGTTGGGAAATCTCCTGAAAATGTGAATGTTGATTCTAAGAAGATATCTCTTGCTGGAGGCCTGGGAGAGGGTACTCCAAAGAGTGAAAGGTCAGAGGATAAGTTTTGTGATGATATATTTGGTGAGACGCCAACGGGAGTTCGGAAATCAGGAAAAGGAGATGGTTTACTGATTGAGAGGGTTGGCCTACATGACAATTGGGACGATGCAGAGGGTTATTACAGCTATCGTATTGGTGAAATACTCGATGGCCGATATGAAGTCACTGCTGCACATGGGAGGGGTGTCTTTTCAACAGTTGTTCGGGCAAAGAATCTAAAGATGGGAAATGGTGAGCCAGAAGAAGTAGCAATAAAAATTATTCGTAATAATGACACCATGTACAAGGCTGGTATGGATGAATTGGTCATATTGAAGAAATTAGTAGGTGCAGATCCAGACGATAAGCGTCATTGTGTTCGTTTCCTTTCAAGTTTTAGATACAGGAATCATCTTTGTTTAGTTTTTGAATCTCTTAATATGAATCTGCGTGAGGTTTTAAAGAAGTTTGGTCGCAATATTGGCCTTAGGCTAACAGCTGTGAGAGCATACGCAAAACAGCTTTTTATTGCTCTGAAGCATCTCCGGAACTGTGGTGTTCTTCATTGTGATATAAAGCCGGATAATATGTTGGTAAACGAGGCTAAAAATGTTTTGAAGCTTTGTGACTTTGGTAATGCCATGTTTGCTGGTAAAAATGAAGTTACACCATATCTTGTGAGTCGTTTTTATCGTGCCCCGGAAATAATACTTGGCTTGCCATATGATCATCCATTGGATATTTGGTCTGTAGGCTGTTGTTTGTATGAGTTGTATATAGGGAAGGTTCTTTTCCCAGGGCTTACAAACAATGACATGCTACGGCTTCACATGGAACTGAAGGGCCCTTTTCCAAAGAAGATGCTACGTAAGGGAGCATTTACTGAACAGCATTTTGATCAGGACCTGAACTTTCTTGCTACTGAGGAGGATCCTGTAACAAAAAAGACCATAAAGCGGCTGATTCTCAACATTAAGCCAAAGGATATTGGGACACTCATCACTGGCTCTCCCGGGGAGGATCCGAAAATGTTAGCCAACTTTAAGGATCTTCTGGAAAAAGTTTTTGTCTTGGATCCAGACAAGAGGCTAACGGTGTCACAAGCTCTGAACCACCCATTCATCACTGGCAAGTGA 2976 0.4315 MATDARDSRRKHRRSSSPEDVDRSSKRHKHRHRHGSKKRDEEIEFDDRTIAAVPSPTPHRHLPDDDVEEGEILEDEALDGEVGKKETESDVEPGEIKVTGDRDVRSDNQNSGHLTKNSETRNEDIRDDKFISPAIDAEDDVSPNRSSAETRDGKHAQAHTDGVGNGYLDPKSSKGDKWQNGELGHFKGNEKLKGDFDDETLEANARKAYYHRNSSSESGGEKYRISGSSPSHGRYRSRSRSIGHTRDRSRSRSIIDEYAHSKRRRSDYDHDEERVRERGREHGHGNVVDDRREYSTRYHSREARDRDRSRDRDVDRDLHREKKQEETIRGKEIEWEHKRGKERERSRERYRRDVEKDRSREREEDRGRRQEKERDRSWDTVFERDWRREKERDRSRDRTRGGKRDRDLENERDDKNRERDNIKERERRDDRYKHKDRDNANGKDRHLRHEDGNDNGDRYRKHSRHEENEYHWERKRNSDNPVKVYNSMGITAEVDESKLISSEVEPDDLEEDTLQLPEQEEEDLNRIKEESRRRREAIMKKYKKQHQQVEEAVGNEGKDKDADIATDISEARDDKNGDTDYVEQSFAVGKSPENVNVDSKKISLAGGLGEGTPKSERSEDKFCDDIFGETPTGVRKSGKGDGLLIERVGLHDNWDDAEGYYSYRIGEILDGRYEVTAAHGRGVFSTVVRAKNLKMGNGEPEEVAIKIIRNNDTMYKAGMDELVILKKLVGADPDDKRHCVRFLSSFRYRNHLCLVFESLNMNLREVLKKFGRNIGLRLTAVRAYAKQLFIALKHLRNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAMFAGKNEVTPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYIGKVLFPGLTNNDMLRLHMELKGPFPKKMLRKGAFTEQHFDQDLNFLATEEDPVTKKTIKRLILNIKPKDIGTLITGSPGEDPKMLANFKDLLEKVFVLDPDKRLTVSQALNHPFITGK 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00497 991 CDD STKc_PRP4 672 988 IPR044092 GO:0004674|GO:0006468|GO:0045292
Pumo3g00497 991 MobiDBLite consensus disorder prediction 496 531 - -
Pumo3g00497 991 MobiDBLite consensus disorder prediction 209 236 - -
Pumo3g00497 991 PANTHER DUAL SPECIFICITY PROTEIN KINASE 388 989 - -
Pumo3g00497 991 Pfam Protein kinase domain 675 988 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g00497 991 MobiDBLite consensus disorder prediction 175 206 - -
Pumo3g00497 991 SUPERFAMILY Protein kinase-like (PK-like) 660 990 IPR011009 -
Pumo3g00497 991 FunFam Serine/threonine-protein kinase PRP4 homolog 733 989 - -
Pumo3g00497 991 Gene3D Phosphorylase Kinase; domain 1 644 732 - -
Pumo3g00497 991 MobiDBLite consensus disorder prediction 1 483 - -
Pumo3g00497 991 Coils Coil 405 428 - -
Pumo3g00497 991 SMART serkin_6 673 988 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g00497 991 MobiDBLite consensus disorder prediction 240 480 - -
Pumo3g00497 991 FunFam serine/threonine-protein kinase PRP4 homolog 644 732 - -
Pumo3g00497 991 Gene3D Transferase(Phosphotransferase) domain 1 733 989 - -
Pumo3g00497 991 ProSitePatterns Serine/Threonine protein kinases active-site signature. 800 812 IPR008271 GO:0004672|GO:0006468
Pumo3g00497 991 MobiDBLite consensus disorder prediction 117 135 - -
Pumo3g00497 991 MobiDBLite consensus disorder prediction 142 158 - -
Pumo3g00497 991 MobiDBLite consensus disorder prediction 605 637 - -
Pumo3g00497 991 MobiDBLite consensus disorder prediction 77 109 - -
Pumo3g00497 991 ProSiteProfiles Protein kinase domain profile. 673 988 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g00497 991 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00497 Pumo-Chr3 7246184 7252329 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00497 626 990 MAP Kinase Gene Family AT2G18170 30.446 2.89e-27 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Pumo3g00497 Pkinase 1.5e-46 CL0016