Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00483 ATGGGAAAGAAATCTTTGAAGCTTCCCTTTCTTTTCAAAACCAACAAAGAAGCACCAAGAAAGCATCATCATCCATGGCAATTCATGCCCTCTTGTGGCGACTCAAAGACCCTCTCTTTCCGAGGTGGAGATGATGACATGTTCAAGACAGTTAACTCCGTGTTCTTCGACCCTTCAGCTGAGAGCACCATTGAAACTCCCAAGTCATGGTTCACAACCTCATCTGAATCTGCAAGCATCTCAACTGAGTCAGAAGACTACTACTGTTGTGATGGGGAGTCTTTGGAGATGTTGGTACGTGGTGTGAGGTCAGAGAGGCTTTTTTTCGAACCAGGTGACACAAGTTCCATCTTGGAAAAGGCCAAGGCTAGTGGATTTCCCTTCAAAGAAAGTGTGGTCCTAGCTATGGAGTCAGAGGACCCTTATGAGGACTTTAAGAGATCAATGGAGGAGATGGTTGAGTCTCATGGAGTTAGAGATTGGGAAGGCTTGGAGGAGCTTTTAACTTGGTATTTAAGGGTCAATGGTAGAAATAATCATGGGTTTATAGTGGGTGCTTTTGTTGATTTACTCTTTAGTTTAGCAGCTTCTAATAGTTCTAACTCTTGTTCTGATTCAACTGCATATTCTTCTGCGGTTTCTTCTTTTGCTTCTTCCCCCTTGAGTGGCCAGAATGAGATTGTTGAGCATGGGATTGGGAATGATGATGCTGTAACATCTTAG 723 0.4343 MGKKSLKLPFLFKTNKEAPRKHHHPWQFMPSCGDSKTLSFRGGDDDMFKTVNSVFFDPSAESTIETPKSWFTTSSESASISTESEDYYCCDGESLEMLVRGVRSERLFFEPGDTSSILEKAKASGFPFKESVVLAMESEDPYEDFKRSMEEMVESHGVRDWEGLEELLTWYLRVNGRNNHGFIVGAFVDLLFSLAASNSSNSCSDSTAYSSAVSSFASSPLSGQNEIVEHGIGNDDAVTS 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00483 240 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 39 196 IPR038933 GO:0045892
Pumo3g00483 240 NCBIfam uncharacterized plant-specific domain TIGR01568 132 195 IPR006458 -
Pumo3g00483 240 ProSiteProfiles OVATE domain profile. 134 193 IPR006458 -
Pumo3g00483 240 Pfam Transcriptional repressor, ovate 138 194 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00483 Pumo-Chr3 7017006 7017994 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pumo3g00483 Ovate 4.6e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00483 - - gmx:100527123 418.313