Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00453 ATGGAGCTTTCAGCATTCCCGAGCTTCAAAGCAGTTTCTAATGCTTCCTTGTTCCCATTTTCTTCGAATCAAGTTTGGTGCCGATGCTCTCTTCGTCTTCGTCGGCGCGATTATGGCTTCCGTTGGAGTTCCAAGTCAAAACCGTTTGTTCGGATCAGGATGTGCTCGGAGAAAGCTTCGTCGTTGAATGGTTATGGTGGAATCGACAGCGGAGAAACGAACTCTGATTTCGTCGAAGTCATTGGCATTGGCTCTAGGAAGGACGCTGTTTTTGATTTCTGCTTGAACTCGCCGTTTCAGTTACCGTCGCTGCGGTTTTGGAATATCCTTATGAAAGAATCGGAAGAGGTGCAATTACAACAAAGATCAATTGAAGAAGAACCTCATCCAAGAATCGTCAAAGCTCCAGTATTTTTGAAGTCATGCTCAAAGACTATTGTCCTTGTGGCCAGTGCAGGATATGGCTTGTACCACACTGTTGCAGCTGATATTTTTGAGACTGTAAGGTCCAGGAATGGATTAACAGTTGCTATAGTTTTGAAGCCATTTAGATTTGAAGGGCTTAGACGACAAGATGAGGTGAAAGCCTTGATGCAGAAACTTAAGGAGAACACAAATTTACTTGTTGAAATTGATATTGATGCACTGCTCAAGAAAGACTTGTTGACTCTAGATGAGGCCATGAAGACTGCTAATGATGCAGTTTTGCTAGCTATTAAGGCTGTCTCTGTTCTAAAATCTGAGATGCACAAAAAATTTATAGATAGATTGAATGATAGCATGAAAGAGGCCAGCTCTTCAGAAATTAATAAGATATTGGAATCCTATAAAGAAGCGGGGATTGGATTTGGAGCTGCATATAACATCAAAGCTTCAATTTTGCAGTCTATATTTGATAGTCCTTTCCTGGGTGTTCGTTTGAAGGATCCAAATAGCATAGTTATATGCACTCTTGCATGTTCAAAACCCATCAACGATAGTGATATAGCAATCTTTCTGCGTACTTTCCGCCAAACAACAGAGTACACAAGGGATATTATAATATCAACAATACATGACCCTACTGTTGAGCCCAACCTACTCATAACAACAGTCCTTACACTTGGCTGTTTAAATGCGCAACGGTCTTCCCAGAATGGTGGTATACTGTCCAGACTTGCCCTGCGTTTTCCTCTTATTTTTAGCTTTTGGGGAAGACATAATCAGCAACAAGTTGGCACTGGGAAACAGACTGAAGTATTTCCTCATGAAGTGATGAGTTCTGATGACATTGATGAGAGGACAAATAGGATTGCTTCTGATGACATAGATAACAATCTTGACAAATACTATGAAGAGTTGGAGCCAGCAATGAGCAACAACAGCTCAAAGTTGCCTACTTCAAGGGATTCTGGAAAAAATGAAGATTTATCTGACACCACGTCCAACTATAAAATCCTTTATGACTCTATTACCGAAGGAGTTCCATTAGGTGACTCTGCTTTTCAAAGGGAGCAACTTGAGAACTGGACTCTAGGTCCTGGATTTGAGGTGGCAAAGGAGTGGGCCCAAGAAAAGGCAGCTGATGCTACAGCCATTGTTGATAACCTAAGCATCTTCCACCTTCCTGTTGGTGTGAGGCCTTCAGAAGAGTTGAAAGACTGTTTGGACATCTCATTTATGACAAAACAGCTTGAACTGGATACTGATAATGATGTGAAAACACAAACATTAAATGGAGGTATGTCTCCTTGGAGTGCAGCGACTGATGCAAGTTTGGAAGCAGTGATGGAATTTGCATCTTCACTTTTGAAAGGAAAGAATGTTAATAAATCAAAGAGAGACGGAGTTCTATCTGTTCGTGCTGCATCTATGTTGGAGGCAGAACGTGATTTGTCAAAAAAGTGGAGTCCTGTTGTGGAAATGCAATATAGGGGAGGAAGATACAAGGGACGATGCCAAGGAGGTCTACCTGAAGGGAAGGGGCGTCTTGTTCTCAGAGATGGAAGTATATATGATGGTTTATGGCGCTATGGTAAGAGATCAGGTCCAGGTACATTCTATTTCAAAAACGGAGATATGTTTCAAGGATCATGGAGGGATGATGTCATACACGGCAAGGGTTGGTTTTATTTTCACACTGGTGATCGGTGGTTTGCAAACTTTTGGAAGGGAAAGGCTAATGGTGAGGGGCGGTTCTACACAAAGTCTGGTGATGCCTTCTTTGGCAATTTCAAAGATGGATGGCGACATGGCCAGTTTCTTTGTATTAATGCGAATGGGACAAGGTACACTGAAATTTGGGAACATGGTGTTCTTGTAGATAGCAAGCATTTAGACAGATGA 2325 0.4181 MELSAFPSFKAVSNASLFPFSSNQVWCRCSLRLRRRDYGFRWSSKSKPFVRIRMCSEKASSLNGYGGIDSGETNSDFVEVIGIGSRKDAVFDFCLNSPFQLPSLRFWNILMKESEEVQLQQRSIEEEPHPRIVKAPVFLKSCSKTIVLVASAGYGLYHTVAADIFETVRSRNGLTVAIVLKPFRFEGLRRQDEVKALMQKLKENTNLLVEIDIDALLKKDLLTLDEAMKTANDAVLLAIKAVSVLKSEMHKKFIDRLNDSMKEASSSEINKILESYKEAGIGFGAAYNIKASILQSIFDSPFLGVRLKDPNSIVICTLACSKPINDSDIAIFLRTFRQTTEYTRDIIISTIHDPTVEPNLLITTVLTLGCLNAQRSSQNGGILSRLALRFPLIFSFWGRHNQQQVGTGKQTEVFPHEVMSSDDIDERTNRIASDDIDNNLDKYYEELEPAMSNNSSKLPTSRDSGKNEDLSDTTSNYKILYDSITEGVPLGDSAFQREQLENWTLGPGFEVAKEWAQEKAADATAIVDNLSIFHLPVGVRPSEELKDCLDISFMTKQLELDTDNDVKTQTLNGGMSPWSAATDASLEAVMEFASSLLKGKNVNKSKRDGVLSVRAASMLEAERDLSKKWSPVVEMQYRGGRYKGRCQGGLPEGKGRLVLRDGSIYDGLWRYGKRSGPGTFYFKNGDMFQGSWRDDVIHGKGWFYFHTGDRWFANFWKGKANGEGRFYTKSGDAFFGNFKDGWRHGQFLCINANGTRYTEIWEHGVLVDSKHLDR 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00453 774 MobiDBLite consensus disorder prediction 448 471 - -
Pumo3g00453 774 Gene3D - 713 772 - -
Pumo3g00453 774 SUPERFAMILY Tubulin nucleotide-binding domain-like 79 243 IPR036525 -
Pumo3g00453 774 Gene3D - 640 699 - -
Pumo3g00453 774 PANTHER RADIAL SPOKE HEAD 1 HOMOLOG 103 771 - -
Pumo3g00453 774 PRINTS Cell division protein FtsZ signature 173 194 IPR003008 GO:0005525
Pumo3g00453 774 PRINTS Cell division protein FtsZ signature 267 288 IPR003008 GO:0005525
Pumo3g00453 774 Pfam MORN repeat 735 746 IPR003409 -
Pumo3g00453 774 Pfam MORN repeat 688 710 IPR003409 -
Pumo3g00453 774 Pfam MORN repeat 647 663 IPR003409 -
Pumo3g00453 774 Pfam MORN repeat 665 687 IPR003409 -
Pumo3g00453 774 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 639 767 - -
Pumo3g00453 774 Gene3D Tubulin/FtsZ, GTPase domain 112 368 IPR036525 -
Pumo3g00453 774 SMART morn 732 753 IPR003409 -
Pumo3g00453 774 SMART morn 663 684 IPR003409 -
Pumo3g00453 774 SMART morn 640 661 IPR003409 -
Pumo3g00453 774 SMART morn 686 707 IPR003409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00453 Pumo-Chr3 6610045 6619824 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00453 1 773 PP2C-type Phosphatase Gene Family AT1G75010 45.120 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00453 - - gsj:114371951 1434.85