Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00413 ATGCTTTTCAGGGTAACAATTCCTCAATACTTATTTCTTCTTGGACTTGAATACACGTCTGCCACATTCTCATGTGCGTTCCTCAACATGGTGCCTGTATTTACGTTCATTATGGCAGTGCCATTTGGGATAGAGAAGGTGAACATGCAAAGCAAGAGTGGTAAAGCCAAAGTCATGGGAACTTTTGTGTGCATTGGTGGAGCTTTGTTATTGGTCCTTTATAAAGGAATGCCCCTTATCAACCCACAATCTCAACACATAGCAAACAAAATTAAAAACACACCTCCAACTGCCAAGTTAGAGAAATGGATTATAGGCTCCATACTTCTGACTCTAGGTTGCCTCCTGTGGTCTTCATGGTTCATTATACAAGCAAAGATTAGCAAAAAATACCCATGTCAATACTCTAGCACAGCTATTTTGTCACTTTTTGCTGCCATTCAATCAGCAATATTAACTTTGATCATCAAGAGAAATAATGCTTCATGGATTCTCAAAGGAAAGCTTGAAATATTGAGTGTTGTATATGCTGGATTGATAGGGTCGGGCTTGTGCTATGTGGCAATGTCATGGTGTGTCAAACAAAGGGGTCCAGTTTTTACTGCAGCTTTTACCCCCCTTATGCAGATATTTGTGGCCATGCTTGATTTCTCTGTACTAAAGGAGGAAATTTACCTGGGAAGTGTTGCAGGATCTGCCTTGGTTATTGCTGGCATGTATATTCTTCTATGGGGAAAAAGCAAAGAGGAAGGGCAACATGTTCTGAAGGATACGCAAACAAATCAAGATGTAGAATGTCAATAG 804 0.4017 MLFRVTIPQYLFLLGLEYTSATFSCAFLNMVPVFTFIMAVPFGIEKVNMQSKSGKAKVMGTFVCIGGALLLVLYKGMPLINPQSQHIANKIKNTPPTAKLEKWIIGSILLTLGCLLWSSWFIIQAKISKKYPCQYSSTAILSLFAAIQSAILTLIIKRNNASWILKGKLEILSVVYAGLIGSGLCYVAMSWCVKQRGPVFTAAFTPLMQIFVAMLDFSVLKEEIYLGSVAGSALVIAGMYILLWGKSKEEGQHVLKDTQTNQDVECQ 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00413 267 Pfam EamA-like transporter family 105 243 IPR000620 GO:0016020
Pumo3g00413 267 SUPERFAMILY Multidrug resistance efflux transporter EmrE 4 75 - -
Pumo3g00413 267 PANTHER WAT1-RELATED PROTEIN 2 257 IPR030184 GO:0016020|GO:0022857
Pumo3g00413 267 SUPERFAMILY Multidrug resistance efflux transporter EmrE 144 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00413 Pumo-Chr3 5882232 5883446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00413 30 255 Nodulin-like Gene Family AT4G01440 49.345 2.34e-76 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00413 - - gmx:100806247 502.286