Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00388 ATGACAGACGTGAAACTACTTGGATTTTGGTCTAGCCCTTTCGTTCATAGAGTGATATGGGCTCTTAAGTTCAAGGGCATCAGTTATGAGTTCATAGAGGTTGATAGGTTCAACAAAGGTCCGCTACTTTTTCAATCAAATCCAGTTTACAAGAAAGTCCCTGTGCTTATTCATGGAGGCAAACCCATTGCAGAGTCTCTTGTGATTCTTCAATACATCGAAGAAACATGGCCAGAAAACCCATTGCTGCCAAAAGACAACCACGAGAGGGCCTTAGCTCGCTTTTGGATTAAATTTGGAGAGGATTCGATCGCCTCTATTACTGATTTGTTTCTCCGACCCTGTAAAGATGAGGAAGAAAGAGCAATTGCATGGAAAAGGGCAGAAGAAACTATCAGGGTAATGGAAGAGCAAGGTCTAGGGGACAAGAAGTTCTTTGGAGGTAACAACATTGGAATGGTGGACATGGCATATGGATGCCTAAGTCATTGGTTAGAAGGCTTGGAGGAAATTGTGGGGATGAAACTGATTGAGCCTAACAAATTTCCTCGGTTGCATGCCTGGACTCAAAATTTCAAACAAGTTCCTCTCATTAAAGAAAACCTTCCTGATTATGGCAAATTGTTGATCCATCTTCAATGGCGCAGGCAACGATATGTTACACAGTAG 669 0.423 MTDVKLLGFWSSPFVHRVIWALKFKGISYEFIEVDRFNKGPLLFQSNPVYKKVPVLIHGGKPIAESLVILQYIEETWPENPLLPKDNHERALARFWIKFGEDSIASITDLFLRPCKDEEERAIAWKRAEETIRVMEEQGLGDKKFFGGNNIGMVDMAYGCLSHWLEGLEEIVGMKLIEPNKFPRLHAWTQNFKQVPLIKENLPDYGKLLIHLQWRRQRYVTQ 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00388 222 CDD GST_N_Tau 4 77 - -
Pumo3g00388 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Pumo3g00388 222 Pfam Glutathione S-transferase, N-terminal domain 4 74 IPR004045 -
Pumo3g00388 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 220 IPR010987 -
Pumo3g00388 222 SUPERFAMILY GST C-terminal domain-like 75 219 IPR036282 -
Pumo3g00388 222 Gene3D Glutaredoxin 1 85 - -
Pumo3g00388 222 SUPERFAMILY Thioredoxin-like 3 102 IPR036249 -
Pumo3g00388 222 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 6 203 IPR045073 -
Pumo3g00388 222 Pfam Glutathione S-transferase, C-terminal domain 115 193 IPR004046 -
Pumo3g00388 222 SFLD Main (cytGST) 2 220 - -
Pumo3g00388 222 FunFam Tau class glutathione S-transferase 83 222 - -
Pumo3g00388 222 CDD GST_C_Tau 88 215 IPR045074 GO:0004364|GO:0006749
Pumo3g00388 222 FunFam Putative glutathione S-transferase 1 83 - -
Pumo3g00388 222 SFLD Main.3: Omega- and Tau-like 2 220 IPR045073 -
Pumo3g00388 222 Gene3D - 86 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00388 Pumo-Chr3 5615594 5616805 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00388 3 218 Glutathione S-transferase Gene Family AT2G29420 44.444 2.37e-58 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00388 K00799 - gmx:547586 405.601