Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00381 ATGGTACTTCAAAATCTTCGCTTAGACTTTGGTCGAATTTTCTGCATTCCCCTAACAGTTACCGTTGTTCTCTCTTCCGCGGTTCTGTTTCCTTCCGCCGCATTTTCTCACCACCGCCGTCTCGTCGCCTCCGCATCCCCGATGAATCCGTCGTCGCAGTCTCAGTCTCCGCCTCCTCCGGTGGCGAAGAAGGTGGAGCACGCTATGGAGATGTTCGGCGACGTGAGAATCGACAACTACTATTGGCTCCGAGACGATTCCCGCACCGATCCTGAAGTGCTCTCGTACCTCCGCCAGGAGAATGCGTACACCGATTCCATCATGTCTGGAACTAAGGAATTTGAAGATAAGCTTTTAGCTGAGATAAGAGGAAGGATTAAGGAGGAGGATGTCTCTGCACCTAGACGCAAAGGGCATTATTACTATTATGAGAGAACTTTGGAAGGGAAGGAGTATGTTCAACGTTGTAGGTGCCTTATATCTGATAGCCAAAAGGTTCCATCTGTGCATGACACCATGCCCACAGGACCTGAAGCTCCTAAAGAGCATGTTATTTTGGATGAGAATGTCAAGGCACAACATCACCAATACTACAGTATTGGTGCTTTTAAAGTTAGCCCAAACAACAAGTTGGTAGCATATGCAGAAGACACCAAAGGAGATGAAATATATACTGTTTATGTCATTGATGCTGAGACTCAAGCTCCTATTGGAGAGCCTCTTGTTGGTGTAACACGACACCTTGAATGGGCTGGTGATGATGCTTTAGTTTATATCACAATGGATGAGATTCACAGGCCTTACAAGGCATGGTTTCATGTGTTGGGAACAGAACGATCAAAAGACACTTCTCTTTACGTGGAAAAGGACGATATGTTTTCTCTTCGTCTTTACGCTTCTAAGAGCAAGAAATATCTGTTTGTTGCATCACATAGTAAAAATACAAGCTTCAATTTTTATCTGGATGTTTCTAAGCCTGAAGAAGGTCTTAAAGTTCTGACACCACGTGTTGATGGTGTTGGCACAACTGTCAGCCATCGTGGAGATCATTTCTTTATTAAGAGGAGAAGTGATCAGTTTTTCAATTCAGAGGTTGTAGCTTGTGCTGTCAATAACACCTCCTCAACTACAGTTCTTATTCCCCACAGGGAAAGTGTTAAAATTCAGGAGATACAACTTTTTAGTGATCATCTTGTAGCATACGAGAGAGAAAATGGTCTACTAAAAATAATAGTTTATCACCTTCCACCAATTGGTGAACCACTAAGGAGCCTTGAAAGCAGTCAGGCAGTTAATTTTATTGATCCTGCATACTCAGTGACATCTGAAGATTCAGAGTTTTCATCAAGTATTTTACGGTTTTCATATAGCTCATTGAGGACTCCTTCCTCAGTATATGATTATGATATGAAGGCAGGCATTTCAGTTTTGAAGAAGATTGAGTCGGTTCTGGGAGATTTTGATGCAACACGTTATGTCACTGAAAGGCAGTGGGCATGTGCTTTGGATGGAACTTTTATTCCCATATCAATTGTTTACCGAAAAGATCTTGTGAAACTTGATGGATCAGATCCGTTACTACTTTATGGATATGGATCATATGAGATATGCAAAGATCCTAGTTTCAATTCTGCAAGGCTTTCATTGTTAGATCGGGGTTTTATATATGCAATAGCTCATATACGTGGAGGAGGTGAAATGGGGAGGCAGTGGTATGAAAATGGGAAGCTGTTGAAGAAAAATAACACTTTTACTGATTTTATTGCATGTGCTGAATATTTGATAGAAAAAAAAAATTGTTCTAAGGAAAGACTCTGCATCAGTGGAGGAAGTGCCGGTGGTTTGCTAATTGGTGCAGTTCTTAATATGAGACCAGATTTATTCAAGGCTGCTGTTGCTCGAGTACCTTTTGTGGATGTTTTGACAACAATGCTTGATCCAACCATTCCTCTCACTACCTCAGAATGGGAGGAATGGGGTGATCCCAGAAAGGAGGAATTCTACTTCTACATGAAATCATATTCCCCCGTTGATAACGTGAAGGCACAGAATTATCCACACATTCTTGTTACAGCTGGATTAAATGACACACGGGTTTTGTATTCTGACCCTGCGAAGTTTGTGGCAAAACTGAGGGATATGAAGACTGATGATAACATGCTCCTGTTTAAATGCGATTTTGGTGCTGGGCATTTCTCAAAGTCGGGAATGTAA 2214 0.4182 MVLQNLRLDFGRIFCIPLTVTVVLSSAVLFPSAAFSHHRRLVASASPMNPSSQSQSPPPPVAKKVEHAMEMFGDVRIDNYYWLRDDSRTDPEVLSYLRQENAYTDSIMSGTKEFEDKLLAEIRGRIKEEDVSAPRRKGHYYYYERTLEGKEYVQRCRCLISDSQKVPSVHDTMPTGPEAPKEHVILDENVKAQHHQYYSIGAFKVSPNNKLVAYAEDTKGDEIYTVYVIDAETQAPIGEPLVGVTRHLEWAGDDALVYITMDEIHRPYKAWFHVLGTERSKDTSLYVEKDDMFSLRLYASKSKKYLFVASHSKNTSFNFYLDVSKPEEGLKVLTPRVDGVGTTVSHRGDHFFIKRRSDQFFNSEVVACAVNNTSSTTVLIPHRESVKIQEIQLFSDHLVAYERENGLLKIIVYHLPPIGEPLRSLESSQAVNFIDPAYSVTSEDSEFSSSILRFSYSSLRTPSSVYDYDMKAGISVLKKIESVLGDFDATRYVTERQWACALDGTFIPISIVYRKDLVKLDGSDPLLLYGYGSYEICKDPSFNSARLSLLDRGFIYAIAHIRGGGEMGRQWYENGKLLKKNNTFTDFIACAEYLIEKKNCSKERLCISGGSAGGLLIGAVLNMRPDLFKAAVARVPFVDVLTTMLDPTIPLTTSEWEEWGDPRKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDTRVLYSDPAKFVAKLRDMKTDDNMLLFKCDFGAGHFSKSGM 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00381 737 Pfam Prolyl oligopeptidase, N-terminal beta-propeller domain 59 478 IPR023302 GO:0004252
Pumo3g00381 737 SUPERFAMILY Peptidase/esterase 'gauge' domain 56 488 - -
Pumo3g00381 737 Pfam Prolyl oligopeptidase family 540 735 IPR001375 GO:0006508|GO:0008236
Pumo3g00381 737 Gene3D alpha/beta hydrolase 78 736 IPR029058 -
Pumo3g00381 737 PANTHER PROTEASE FAMILY S9A OLIGOPEPTIDASE 42 736 - -
Pumo3g00381 737 Gene3D - 129 482 - -
Pumo3g00381 737 SUPERFAMILY alpha/beta-Hydrolases 492 732 IPR029058 -
Pumo3g00381 737 FunFam Prolyl endopeptidase 458 737 - -
Pumo3g00381 737 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 685 707 IPR002470 GO:0004252|GO:0006508
Pumo3g00381 737 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 609 629 IPR002470 GO:0004252|GO:0006508
Pumo3g00381 737 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 551 575 IPR002470 GO:0004252|GO:0006508
Pumo3g00381 737 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 525 543 IPR002470 GO:0004252|GO:0006508
Pumo3g00381 737 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 579 598 IPR002470 GO:0004252|GO:0006508
Pumo3g00381 737 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 667 682 IPR002470 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00381 Pumo-Chr3 5465926 5549256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00381 525 640 Carbohydrate Esterase AT5G36210 32.203 2.51e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00381 K01354 - gmx:100820540 1298.11