Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00380 ATGGTTTTTGTTGACTACTTTCAACCTAACCCACCATTCACAATCTTGGCTCTGGCTCTGGCTCTGGCTCTGCCCTTTTTGGCTTTCTCTCGAAACCGGAACCATTTGTGGTGGGCATGGATTTGGACCAGTGGATCTCCAAGGTCAAAGATGGAGAGCATCTTCTCGAAGACGAGCTTCAACTTCTCTGCGAATATGTACCCTTCTTTCTCTTCGCTTTTCTTTCTACCAAACCCTCTCATGCCCAGGGAATCTGATTATGCATTTTGTTCCCATCGCCTTTTCGATCCAAGTCTTTGTTCTTCTCACGTTATGAGGATGGTAAAAGAGATCCTTATTGAGGAGTCCAACGTGCAGCCTGTCAATAGTCCAGTAACTGTTTGTGGTGATATTCATGGTCAATTCCATGATCTAATGAAACTTTTCCAAACTGGGGGTCATGTGCCTGAGACAAATTATATTTTTATGGGAGACTTTGTTGATCGAGGTTACAATAGTCTTGAAGTTTTCACCATCCTTTTACTTCTAAAAGCTAGATACCCAGCTAATATTACCCTTTTACGTGGAAATCATGAAAGTAGACAATTAACCCAGGTCTATGGATTTTATGATGAATGCCAGAGGAAGTATGGCAATGCCAATGCTTGGCGGTATTGTACAGATGTGTTTGACTATCTAACACTTTCTGCAATTATTGATGGAACCGTGCTTTGTGTTCATGGTGGCCTGTCTCCTGACATTCGAACAATTGATCAGATAAGGGTCATTGACCGGAACTGTGAAATTCCTCATGAGGGTCCTTTCTGTGATCTAATGTGGAGTGATCCTGAAGATATTGAAACATGGGCAGTCAGTCCCCGTGGAGCAGGTTGGCTTTTTGGATCCAGGGTCACTTCGGAGTTCAATCACATAAATAATCTTGATCTTGTTTGTCGAGCGCACCAACTTGTTCAAGAAGGTCTTAAGTATATGTTCCAAGATAAAGGCCTTGTAACTGTATGGTCTGCGCCTAATTACTGTTACCGATGTGGAAATGTAGCTTCTATTCTGAGTTTCAATGAAAATATGGAAAGAGAAGTTAAATTTTTCACTGAAACAGAGGAGAACAATCAGATGAGAGGGCCCAGGACAGGCGTTCCATATTTCTTATGA 1152 0.4201 MVFVDYFQPNPPFTILALALALALPFLAFSRNRNHLWWAWIWTSGSPRSKMESIFSKTSFNFSANMYPSFSSLFFLPNPLMPRESDYAFCSHRLFDPSLCSSHVMRMVKEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFQTGGHVPETNYIFMGDFVDRGYNSLEVFTILLLLKARYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIDRNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENMEREVKFFTETEENNQMRGPRTGVPYFL 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00380 383 FunFam Serine/threonine-protein phosphatase 96 383 - -
Pumo3g00380 383 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 104 383 IPR047129 GO:0004722
Pumo3g00380 383 CDD MPP_PP2A_PP4_PP6 98 365 - -
Pumo3g00380 383 Pfam Calcineurin-like phosphoesterase 124 315 IPR004843 GO:0016787
Pumo3g00380 383 PRINTS Serine/threonine phosphatase family signature 186 210 IPR006186 GO:0016787
Pumo3g00380 383 PRINTS Serine/threonine phosphatase family signature 306 326 IPR006186 GO:0016787
Pumo3g00380 383 PRINTS Serine/threonine phosphatase family signature 153 180 IPR006186 GO:0016787
Pumo3g00380 383 PRINTS Serine/threonine phosphatase family signature 221 247 IPR006186 GO:0016787
Pumo3g00380 383 PRINTS Serine/threonine phosphatase family signature 329 345 IPR006186 GO:0016787
Pumo3g00380 383 PRINTS Serine/threonine phosphatase family signature 124 151 IPR006186 GO:0016787
Pumo3g00380 383 PRINTS Serine/threonine phosphatase family signature 250 277 IPR006186 GO:0016787
Pumo3g00380 383 ProSitePatterns Serine/threonine specific protein phosphatases signature. 187 192 IPR006186 GO:0016787
Pumo3g00380 383 SMART pp2a_7 96 367 IPR006186 GO:0016787
Pumo3g00380 383 SUPERFAMILY Metallo-dependent phosphatases 104 366 IPR029052 -
Pumo3g00380 383 Gene3D - 88 383 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00380 Pumo-Chr3 5457491 5462541 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00380 94 301 Calmodulin-binding Proteins AT5G63870 34.286 4.65e-29 112