Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00361 ATGGCAGTCTATAGAATTGCAATTGGGTCGCCTAGAGAGGCTAGCAATCCTGCTGCAATCAGAGCAGCATTTGCAGAGTTCTTCTCTATGCTCATTTTTGTCTTTGCAGGGCAAGGCTCTGGCATGGCCTATAGCAAACTTACCGGCAATGGACCTGCAACTCCTACTGGTCTCATAGTTGCATCGTTGTCTCATGCATTTGGGCTTTTTGTGGCGGTTGCTGTGGGGGCAAACATTTCTGGAGGAAACATAACCCTCTTGAGAAGTATTTTGTATTGGATTGCACAGTTGCTGGGTTCAGTTGTTGCTTGCATTCTTCTCAATTTTGCTACTGGTGGAATGGAAACATCAGCTTTCTCTCTGTCCTCTGGAGTGTCAGTGTGGAATGCACTAGTTTTTGAGATTGTGATGACTTTTGGTTTGGTATACACAGTTTATGCCACAGCAGTGGACCCAAAGAAGGGGAATGTGGGTGTTATTGCCCCAATAGCAATTGGGTCCATTGTGGGTGCCAACATCTTGGTTGGTGGGGCTTTTGATGGAGCATCCATGAACCCGGCTGTGTCTTTTGGGCCAGCTGTGGTTAGCTGGTCATGGACTCATCACTGGGTCTATTGGCTTGGCCCATTCATTGGTTCAGCTGCTGCTGCCATTCTCTATGATAATATCTTCATTGGTGATGATGGTCATGAACCCCTTACAAATAGTGATTTCTAG 717 0.4644 MAVYRIAIGSPREASNPAAIRAAFAEFFSMLIFVFAGQGSGMAYSKLTGNGPATPTGLIVASLSHAFGLFVAVAVGANISGGNITLLRSILYWIAQLLGSVVACILLNFATGGMETSAFSLSSGVSVWNALVFEIVMTFGLVYTVYATAVDPKKGNVGVIAPIAIGSIVGANILVGGAFDGASMNPAVSFGPAVVSWSWTHHWVYWLGPFIGSAAAAILYDNIFIGDDGHEPLTNSDF 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00361 238 PANTHER AQUAPORIN-8 6 232 IPR034294 -
Pumo3g00361 238 FunFam Probable aquaporin TIP1-1 4 237 - -
Pumo3g00361 238 Pfam Major intrinsic protein 15 220 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo3g00361 238 SUPERFAMILY Aquaporin-like 16 227 IPR023271 -
Pumo3g00361 238 Gene3D Glycerol uptake facilitator protein. 4 238 IPR023271 -
Pumo3g00361 238 PRINTS Major intrinsic protein family signature 166 188 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo3g00361 238 PRINTS Major intrinsic protein family signature 88 107 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo3g00361 238 PRINTS Major intrinsic protein family signature 133 151 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo3g00361 238 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo3g00361 238 PRINTS Major intrinsic protein family signature 203 223 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00361 Pumo-Chr3 5247587 5248853 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00361 1 238 Major Intrinsic Protein MIP AT4G01470 76.984 1.94e-136 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00361 K09873 - gmx:100818197 436.032