Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00345 ATGATCTCAAACTCGGACCCTGTAGAACTAGTCACGGCGGCCACCGCCGGCGCCGCCGACCCCGACGCCGCCGTCGCCGTCGCAACTGCCGCTTCTTCTTCCAATGAAGATCAACCTGCACCGCCGGCGGCACCGAACATTGTGATGTCCTCCAGAGATCACGATTCTCTCTTCAGCGGTGGCGGCATGAGCTTTCTCTCTGGAAGCCGAAATGGAAGGTTCAGCTATGGATATTCCAGTTTCAAGGGTAAAAGGTCATCAATGGAGGATTTCTTTGAGACCAGAATATCAGAGGTTGATGGTCAGACGGTTGCGTTTTTTGGCGTCTTCGATGGTCATGGAGGTTCCCGGACTGCAGAATATCTGAAAAATAATCTGTTTAAGAATTTGAGTAGCCACCCTGACTTTATCAAAGACACAAAGACTGCCATAGTTGAAGCATTTAAACAGACAGATGTTGACTACCTCAATGAGGAAAAGGGGCATCAAAGGGATGCTGGGTCAACCGCATCAACAGCTATGTTGTTGGGGGACCGGATTGTTGTTGCAAATGTTGGTGATTCCAGAGTAGTTGCATGTAGAGCTGGTTCAGCTGTTCCTTTGTCTATCGATCACAAACCTGATAGATCTGATGAACGTCAAAGGATTGAACAGGCTGGGGGATTCATAATTTGGGCTGGAACATGGAGAGTTGGTGGTGTTCTTGCTGTTTCCCGTGCATTTGGAGACAAACTTCTTAAGCCATATGTTGTTGCTGACCCTGAAATTCAGGAGGAAGAAATTGATGGTGTAGATTTTATTATAATTGCTAGTGATGGCCTTTGGAATGTCATATCAAACAAGGAGGCCGTGTCTTTAGTACAAAATATCACAGATGCAGAAGTGGCGTCCAGAGAACTTATAAAAGAAGCTTATGCACGAGGAAGCTCAGATAACATAACTTGTGTTGTTGTTCGATTTGATCTATCCTGA 972 0.463 MISNSDPVELVTAATAGAADPDAAVAVATAASSSNEDQPAPPAAPNIVMSSRDHDSLFSGGGMSFLSGSRNGRFSYGYSSFKGKRSSMEDFFETRISEVDGQTVAFFGVFDGHGGSRTAEYLKNNLFKNLSSHPDFIKDTKTAIVEAFKQTDVDYLNEEKGHQRDAGSTASTAMLLGDRIVVANVGDSRVVACRAGSAVPLSIDHKPDRSDERQRIEQAGGFIIWAGTWRVGGVLAVSRAFGDKLLKPYVVADPEIQEEEIDGVDFIIIASDGLWNVISNKEAVSLVQNITDAEVASRELIKEAYARGSSDNITCVVVRFDLS 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00345 323 MobiDBLite consensus disorder prediction 28 51 - -
Pumo3g00345 323 PANTHER PROTEIN PHOSPHATASE 50 320 IPR015655 GO:0004722|GO:0006470
Pumo3g00345 323 FunFam probable protein phosphatase 2C 59 67 323 - -
Pumo3g00345 323 ProSitePatterns PPM-type phosphatase domain signature. 106 114 IPR000222 GO:0043169
Pumo3g00345 323 CDD PP2Cc 74 320 IPR001932 -
Pumo3g00345 323 ProSiteProfiles PPM-type phosphatase domain profile. 75 320 IPR001932 -
Pumo3g00345 323 SMART PP2C_4 64 318 IPR001932 -
Pumo3g00345 323 Pfam Protein phosphatase 2C 76 313 IPR001932 -
Pumo3g00345 323 Gene3D - 68 322 IPR036457 -
Pumo3g00345 323 SUPERFAMILY PP2C-like 68 321 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00345 Pumo-Chr3 4945817 4951027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00345 47 323 PP2C-type Phosphatase Gene Family AT1G43900 74.368 2.34e-157 443