Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00337 ATGGCTGCAAGTTCTGTCTCTTTGTCCTTTCCCGGCTTCAAACTAATAATAAAGTTTTGGTTGATTTTAATTGCATGTGTTATTGGGGTAACTTGTGATGAGTTATCCACTACATTCTATGATAAAACTTGTCCCAAAGCCCTTACCACCATTAGGAAAGAAGTGGAACGTGCTGTGCGCAATGAGAGTCGCATGGGGGCCTCCTTGCTCCGACTCCACTTCCATGACTGCTTCGTTCAAGGATGTGATGCATCAGTATTGTTAGACGACACGGCAAATTTCACTGGCGAGAAGAATTCATTTCCTAATGCTAACTCCCTTAGGGGATTTGAGGTCATAGATAACATAAAATCCAAGTTGGAGGGCATGTGTAAAGGCGTTGTCTCTTGTGCTGACATCTTAGCCGTTGCTGCGCGAGACGCTGTTGTTGCTCTTGGTGGACAAAAATGGGACGTACAAGTAGGCAGAAGAGATTCAACCACAGCAAGTTTGGATGAAGCTAATTCAGACTTACCAGCTCCCTTTTTGGATCTTAGTGGCCTCATCACTGCTTTCGCCAAGAAAAATTTCACCACCGAAGAACTGGTTACTTTAACAGGTGGTCACACAATAGGACTAGTGAGGTGTCGTTTCTTGAGAGCGAGGATTTATAACGAGAGCAACATAGATCCCACGTTTGCAAAACAAATGCAAGCACTGTGTCCCTTCGAAGGTGGTGACGACAATTTGTCTCCTTTCGATTCCACCACTCCGTTCAAATTTGACAACTCATTCTACAAGAACTTGGTGCAGCTAAAGGGTGTAATACACTCGGACCAACAACTCTTGAGCAACAATGGATCTGGTCCCACAAACGCTCAAGTAACTAGATATAGCAGAAGCATGGGAAATTTCAAGAAGGACTTTGCAGATGCAATGTTTAAGATGAGCATGCTCACCCCACTAACTGGCTCCGACGGTCAGATCAGGCAAAACTGCAGGCTAGTCAATCCATCATCATCAACCACTCTCTCGTGA 1017 0.4464 MAASSVSLSFPGFKLIIKFWLILIACVIGVTCDELSTTFYDKTCPKALTTIRKEVERAVRNESRMGASLLRLHFHDCFVQGCDASVLLDDTANFTGEKNSFPNANSLRGFEVIDNIKSKLEGMCKGVVSCADILAVAARDAVVALGGQKWDVQVGRRDSTTASLDEANSDLPAPFLDLSGLITAFAKKNFTTEELVTLTGGHTIGLVRCRFLRARIYNESNIDPTFAKQMQALCPFEGGDDNLSPFDSTTPFKFDNSFYKNLVQLKGVIHSDQQLLSNNGSGPTNAQVTRYSRSMGNFKKDFADAMFKMSMLTPLTGSDGQIRQNCRLVNPSSSTTLS 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00337 338 CDD secretory_peroxidase 34 329 IPR033905 GO:0004601|GO:0042744
Pumo3g00337 338 PRINTS Plant peroxidase signature 108 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g00337 338 PRINTS Plant peroxidase signature 193 205 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g00337 338 PRINTS Plant peroxidase signature 68 88 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g00337 338 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g00337 338 PRINTS Plant peroxidase signature 44 63 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g00337 338 PRINTS Plant peroxidase signature 146 161 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g00337 338 PRINTS Plant peroxidase signature 127 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g00337 338 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g00337 338 PRINTS Plant peroxidase signature 304 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g00337 338 FunFam Peroxidase 38 176 - -
Pumo3g00337 338 ProSiteProfiles Plant heme peroxidase family profile. 34 330 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo3g00337 338 FunFam Peroxidase 172 309 - -
Pumo3g00337 338 Gene3D Peroxidase, domain 2 172 309 - -
Pumo3g00337 338 ProSitePatterns Peroxidases proximal heme-ligand signature. 194 204 IPR019793 -
Pumo3g00337 338 Gene3D - 38 327 - -
Pumo3g00337 338 ProSitePatterns Peroxidases active site signature. 66 77 IPR019794 GO:0004601
Pumo3g00337 338 PRINTS Haem peroxidase superfamily signature 194 209 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo3g00337 338 PRINTS Haem peroxidase superfamily signature 128 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo3g00337 338 PRINTS Haem peroxidase superfamily signature 146 158 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo3g00337 338 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo3g00337 338 PRINTS Haem peroxidase superfamily signature 66 80 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo3g00337 338 PANTHER PEROXIDASE 72-RELATED 32 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g00337 338 Pfam Peroxidase 52 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo3g00337 338 SUPERFAMILY Heme-dependent peroxidases 34 330 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00337 Pumo-Chr3 4878506 4880055 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00337 34 330 Peroxidase AT5G05340 55.184 6.94e-116 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00337 K00430 - gmx:100802244 593.578