Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00335 ATGTCATCTCGCATTGTTGCGGAGAATTCATTATCAGTCACCAATGCGACCACGCCATATTTTGACTTAATGGAACTGGACGACCTCACGCGCCGCCCAGCCGCCTCCGAAATGCCCACCCTTGGCCAGCTCCTCAAGCACGTCGGAGACGCGCGGAAGGAAGCCGCCGGCGACGGAAGCGAGACGCCGGTGCACCACGCCCTCGACATCGCCGACGCCGCCGGAATTGAGCCTCGCTCGCTGCCGTTCGTCCTCTCCTTCACCAACCTCACCTACAGCGTCAAGGTTCACCGCAAAATGAGCCTCTCCTCAATCTTCCTCGGAGCGGCGGCGGTGTCGGAGGGGCCGGCGGTCGGCGAGAGCATGTTCACGCGGACGAAGACGCTGCTGAACGACATCTCAGGCGAGGCGCGCGACGGCGAGATCATGGCGGTCCTCGGCGCCAGCGGTTCGGGAAAGTCAACCCTAATCGACGCGCTGGCGAACAGAATCGCGAAGGGAAGTCTAAAAGGCACGGTGGCGCTGAACGGCGAAGCGCTGGAATCGCGTCTTCTGAAGGTGATTTCGGCGTACGTGATGCAAGACGACCTTCTCTTCCCAATGCTCACTGTGGAAGAGACACTCATGTTCGCGGCGGAGTTCCGACTTCCTCGCACTCTCTCAAAGTCGAAGAAAAGCGCACGCGTGCAGGCACTCATCGACCAGCTAGGTCTCCGGAACGCCGCGAAAACGGTAATCGGAGACGAAGGCCACCGCGGAGTCTCCGGCGGAGAGCGGCGGAGAGTGTCGATCGGCACCGACATAATCCACGACCCGATCCTGCTGTTCCTTGACGAGCCAACCTCAGGACTTGACTCGACGAGCGCGTTCATGGTGGTGAAGGTGCTGCAGAGAATCGCACAGAGCGGAAGCATCGTCATCATGTCGGTTCACCAACCGAGTTACCGAATCCTAGGGCTTCTGGACCGCATGATCTTCTTATCACGTGGCCAAACCGTTTACAGCGGTTCACCCTCGCAGTTACCACTTTACTTCTCGGAGTTCGGCCATCCAATTCCAGAAAGCGATAACAGAACGGAGTTCGCGTTGGACCTGATTCGCGAGCTCGAAGGTTCTCCCGGCGGAACCAAGAGTTTAGTCGAGTTCAACAAGTCGTGGCAGAGCATGACGAAGCACCACCAAACGACAACGACAACGACAACGGACGCCGGCTTGTCGTTGAAGGAAGCAATAAGCGCCAGCATTTCGAGAGGGAAACTGGTTTCGGGCGCTACCAACACTAACCCAAACCCGTCCTCTATGGTTCCAACCTTTGCGAATCCGTTTTGGGTTGAGATGGCCACGCTGTCGAAACGCTCGTTTTTGAACTCGAGGAGAATGCCGGAGTTGTTTGGGATTAGATTGGGTGCGGTGATGGTCACGGGGTTCATTCTTGCAACCATGTTTTGGCAACTCGATGACTCTCCCAAAGGAGTGCAAGAGAGGCTGGGATTCTTCGCCTTTGCGATGTCAACCACTTTTTACACTACCGCTGACGCGCTTCCTGTGTTTCTTCAAGAACGCTACATTTTCATGAGGGAAACTGCTTACAACGCATATCGCAGGTTGTCGTATTTGGTTTCGCATGCGCTCGTTGCGTTGCCTGCGTTAGCGTTTCTCTCGCTGGCGTTCGCGGCAGCCACGTTTTGGGCCGTGGGCCTGGATGGTGGAATTTCGGGCTTTTTGTTTTACTTTCTAATCATATTGGCTTCCTTTTGGGCCGGGAACTCGTTCGTGACGTTCCTTTCGGGTGTGGTGCCTCACGTGATGCTGGGTTACACTATCGTGGTTGCGATTCTGGCATATTTCTTGCTGTTCAGTGGATTCTTCATTAACAGGGACAGGATTCCAAGTTACTGGATTTGGTTCCACTACTTGTCGTTGGTGAAATACCCATACGAAGCTGTTTTGCAGAACGAGTTCGATGACCCGGTGAAGTGCTTCGTGAGGGGAGTGCAGATTTTCGATAACACGCCACTTGGGTCCGTGCCGGAGGCTCTCAAGTTGAAGCTGTTGGACAGCATGAGCAACACGCTGGGAATGAAGATCACGAGCTCCACGTGTTTGACGACGGGTGCCGATATTTTGCAACAAAATGGGGTCACTGATTTGAGCAAGTGGAACTGCTTGTGGATCACTGTGGCTTGGGGATTCTTCTTTAGGTTCCTCTTCTACTTGTCATTGTTGGTGGGCAGCAAGAACAAGAGGAGGTGA 2253 0.5495 MSSRIVAENSLSVTNATTPYFDLMELDDLTRRPAASEMPTLGQLLKHVGDARKEAAGDGSETPVHHALDIADAAGIEPRSLPFVLSFTNLTYSVKVHRKMSLSSIFLGAAAVSEGPAVGESMFTRTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKGSLKGTVALNGEALESRLLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKSARVQALIDQLGLRNAAKTVIGDEGHRGVSGGERRRVSIGTDIIHDPILLFLDEPTSGLDSTSAFMVVKVLQRIAQSGSIVIMSVHQPSYRILGLLDRMIFLSRGQTVYSGSPSQLPLYFSEFGHPIPESDNRTEFALDLIRELEGSPGGTKSLVEFNKSWQSMTKHHQTTTTTTTDAGLSLKEAISASISRGKLVSGATNTNPNPSSMVPTFANPFWVEMATLSKRSFLNSRRMPELFGIRLGAVMVTGFILATMFWQLDDSPKGVQERLGFFAFAMSTTFYTTADALPVFLQERYIFMRETAYNAYRRLSYLVSHALVALPALAFLSLAFAAATFWAVGLDGGISGFLFYFLIILASFWAGNSFVTFLSGVVPHVMLGYTIVVAILAYFLLFSGFFINRDRIPSYWIWFHYLSLVKYPYEAVLQNEFDDPVKCFVRGVQIFDNTPLGSVPEALKLKLLDSMSNTLGMKITSSTCLTTGADILQQNGVTDLSKWNCLWITVAWGFFFRFLFYLSLLVGSKNKRR 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00335 750 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 100 354 IPR003439 GO:0005524
Pumo3g00335 750 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 66 738 - -
Pumo3g00335 750 SMART AAA_5 139 331 IPR003593 GO:0016887
Pumo3g00335 750 Pfam ABC transporter 130 282 IPR003439 GO:0005524
Pumo3g00335 750 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 125 342 IPR027417 -
Pumo3g00335 750 ProSitePatterns ABC transporters family signature. 254 268 IPR017871 GO:0005524|GO:0016887
Pumo3g00335 750 Gene3D - 120 344 IPR027417 -
Pumo3g00335 750 FunFam ABC transporter G family member 6 119 345 - -
Pumo3g00335 750 Pfam ABC-2 type transporter 311 370 IPR043926 GO:0140359
Pumo3g00335 750 Pfam ABC-2 type transporter 448 654 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00335 Pumo-Chr3 4852033 4854540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00335 129 341 Calmodulin-binding Proteins AT2G36910 29.091 3.12e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00335 K05681 - gmx:100803658 1299.26