Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00318 ATGGCAGCATCTTCAGTGATTGGGGTGATTGATGGTAAATTTGAAAGCGGGTATATAGTTACTGTCACAATGGGTTCAGAGAAACTCAAAGGCGTACTTTATCATGCTCCACAGAACCCTGCAACATTGCCACCATTCCATAACAACAACAACAATGCTTCTGCTGCTGTCCATAGTCGGCGACGCAGGAAGAAATCAGAAATAAAAAGGAAAGATCCTGCTCTTCCAAAACCCAAAAGAACCGACACTAATAGTGGTGATGTTTGA 267 0.427 MAASSVIGVIDGKFESGYIVTVTMGSEKLKGVLYHAPQNPATLPPFHNNNNNASAAVHSRRRRKKSEIKRKDPALPKPKRTDTNSGDV 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00318 88 MobiDBLite consensus disorder prediction 41 88 - -
Pumo3g00318 88 PANTHER HIGH MOBILITY GROUP B PROTEIN 9 2 81 - -
Pumo3g00318 88 MobiDBLite consensus disorder prediction 42 56 - -
Pumo3g00318 88 MobiDBLite consensus disorder prediction 69 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00318 Pumo-Chr3 4668712 4669208 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00318 6 84 ARID Transcription Factor Family AT3G13350 48.148 9.52e-15 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00318 - - gmx:100783284 107.071