Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00313 ATGGTATCAGCTACAATTAGGCGAATTGTGTCACCCTGTTGGAGAGCATCTGACACTGGTGAAATTTCTAGTAGGCATGGAGATGCAAGTGGACGTGCTAACGGTTTGTTGTGGTATAAAGATTCGGGAAGACATGCCAATGGTGAATTCTCAATGGCAGTTATTCAAGCAAACAATTTGTTAGAGGATCAAAGCCAACTTGAATCCGGCCCCTTGAGCTTAGCTGAGGGAAATCCTCAGGGAACTTTTGTTGGTATATACGATGGCCATGGAGGTCCAGAAGCTGCACGGTTTGTCAATGACCGTCTATTTAAAAATATCAAGAAATTTACTTCAGAAAATAATGGAATGTCAGCTGATGTTATCAATAAAGCATTCTTGGCAACTGAAGAAGAATTTATTTCTGTGGTAGAAAAGCAGTGGCTGCACAAGCCGCCGATAGCATCAGTTGGATCTTGCTGTTTGATAGGCATAATATGTAGTGGGGAGCTCTATATTGCAAATGCAGGAGATTCTCGAGCAGTATTAGGTAGACTGGATGAGGCTACGAAAGAGATTAAAGCTGTTCAACTATCCGCGGAGCACAATGCTAGCCTGGCATCTGTCAGAGAAGAGTTGCGCTCATTGCATCCTAATGATCCGCAGATTGTGGTTATGAAGCACCAGGTCTGGCGCGTGAAGGGTCTGATTCAGATTTCAAGATCCATTGGTGATGCCTATCTAAAGAAGGCAGAGTTTAATAAAGCACCATTATTGTCAAAATTTCGACTCTCAGAACCGTTTGAGGAGCCAATCCTTAAAGCTGAACCAGCAATACTAGTACAGAAACTGTGTCCTCAAGATCAGTTTCTAATATTTGCATCAGATGGGTTATGGGAGCACATGACCAATCAAGAAGCGGTTGACATTGTTCAGAGCTGTCCACGTAATGGAGCAGCGAAGAAGCTTGTGAAAACTGCACTCTGTGAAGCTGCGAAGAAAAGAGAAATGAGATACTCAGACTTGAGAAAGATTGACCGAGGGGTGAGGAGACATTTCCATGATGACATCACGGTTATAGTTTTGTATCTTGATTCAAATTTTTTGACCCATGCCAATTCACGTGTACCCTTGGTTTCGATCAAAGGAGGTGGTGATAGTGGTTATGGTATTGGTATTATAGATGCCTAG 1170 0.4274 MVSATIRRIVSPCWRASDTGEISSRHGDASGRANGLLWYKDSGRHANGEFSMAVIQANNLLEDQSQLESGPLSLAEGNPQGTFVGIYDGHGGPEAARFVNDRLFKNIKKFTSENNGMSADVINKAFLATEEEFISVVEKQWLHKPPIASVGSCCLIGIICSGELYIANAGDSRAVLGRLDEATKEIKAVQLSAEHNASLASVREELRSLHPNDPQIVVMKHQVWRVKGLIQISRSIGDAYLKKAEFNKAPLLSKFRLSEPFEEPILKAEPAILVQKLCPQDQFLIFASDGLWEHMTNQEAVDIVQSCPRNGAAKKLVKTALCEAAKKREMRYSDLRKIDRGVRRHFHDDITVIVLYLDSNFLTHANSRVPLVSIKGGGDSGYGIGIIDA 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00313 389 CDD PP2Cc 50 357 IPR001932 -
Pumo3g00313 389 Pfam Protein phosphatase 2C 72 328 IPR001932 -
Pumo3g00313 389 PANTHER PROTEIN PHOSPHATASE 39 355 IPR015655 GO:0004722|GO:0006470
Pumo3g00313 389 SMART PP2C_4 41 355 IPR001932 -
Pumo3g00313 389 ProSitePatterns PPM-type phosphatase domain signature. 83 91 IPR000222 GO:0043169
Pumo3g00313 389 SUPERFAMILY PP2C-like 74 358 IPR036457 -
Pumo3g00313 389 Gene3D - 38 367 IPR036457 -
Pumo3g00313 389 ProSiteProfiles PPM-type phosphatase domain profile. 49 357 IPR001932 -
Pumo3g00313 389 FunFam Phosphatase 2C family protein 38 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00313 Pumo-Chr3 4602405 4606738 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00313 3 379 PP2C-type Phosphatase Gene Family AT3G12620 75.132 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00313 K01102 - gmx:100807559 704.131