Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00286 ATGGACGCCGCCTCCTTCCACCGCCGCAAGGACAAGGTGGTGGTCATCATGGGCGCCACCGGCTCCGGCAAGTCGCGCCTCTCCATCGACCTGGCAACCCTCTTCCCCTCCTCCGAAATCATCAACTCCGACAAGATGCAAGTATACCGCGGCCTCGACATCACCACAAACAAGATCCCCCACGCCCAGCGCCGCGGCGTCCCCCACCACCTCCTCGGCGACGTCGACCCCGACCTCGGCGAGTTCTCCCCCGCCGACTTCCGCCACCGCGCAGCCGACCTCATCGCCGACATCACCCGCCGGAGAAACCTCCCCATCGTGGTCGGCGGCTCCAACTCCTTCGTCCACGCCCTCCTCGTCCAAAACTTCCACCCTCATCAAGAAGGCCTTATATCCTCTGAGTTGAGGTACAGGTGTTGCTTCCTCTGGGTCGACATAGCCTTCCCCGTGTTATCGCAATATTTGCGCCACCGAGTCGACGACATGCTTCACTCGGGGATGGTCGACGAGTTGGCTCAGTTCTTCGACCCGGACGCGGCCCGTCGAACCAGACTCGGTCTCAGAAAGGCCATTGGGGTTCCCGAGTTCGACCGGTTTTTTAATAAATACCCGCCCACGATGGGCCCCGGGAATGAGAATGATCCTCTGCGGGTGCGTGCGTACGAGCAGGCGGTGCGGGCGATTAAGGATAACACGTGCGACTTGGCGGAGCGTCAGATAGGGAAGATCGAACGGTTCAAGCGCGCCGGCTGGGACCTACGGAGGATCGACGCGACCGAGGCGTTTCGGGTTGTGCTGACGTCAGGCTCCGATGTATGGGAGAGACAGGTGTTGGAACCAAGCGTGAAGATTGTGAAACGCTTCTTGATGGAGTAG 876 0.6096 MDAASFHRRKDKVVVIMGATGSGKSRLSIDLATLFPSSEIINSDKMQVYRGLDITTNKIPHAQRRGVPHHLLGDVDPDLGEFSPADFRHRAADLIADITRRRNLPIVVGGSNSFVHALLVQNFHPHQEGLISSELRYRCCFLWVDIAFPVLSQYLRHRVDDMLHSGMVDELAQFFDPDAARRTRLGLRKAIGVPEFDRFFNKYPPTMGPGNENDPLRVRAYEQAVRAIKDNTCDLAERQIGKIERFKRAGWDLRRIDATEAFRVVLTSGSDVWERQVLEPSVKIVKRFLME 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00286 291 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 126 IPR027417 -
Pumo3g00286 291 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 10 289 IPR039657 -
Pumo3g00286 291 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 148 253 - -
Pumo3g00286 291 Pfam IPP transferase 47 123 - -
Pumo3g00286 291 Pfam IPP transferase 132 240 - -
Pumo3g00286 291 Gene3D - 10 289 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00286 Pumo-Chr3 3737938 3738912 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00286 100 289 C2H2 Transcription Factor Family AT2G27760 28.638 2.28e-16 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00286 K10760 - gmx:100813761 505.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g00286 3 3737938 3738912 Pumo3g00286 3 3737938 3738912 ECH