Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00265 ATGGGTCTTCAAATCAAGAAACCGCTCTTTTTCACTCTTGTAACAATATCACTTATTTCATTCTTGCGTTCTTATTTTTCTATACCTTTTTCTCCATGCAATCCTTCTATTGCTATCGCCACCATCATTTTTGTTCTAATCATATACAATTTTTCCTCATCCTCTAAAAAACACTCTTCCACTCTTCCCCCAGGTCCTCTATCTGTTCCCATATTTGGTAACTGGTTACAAGTTGGTAACGACCTTAACCACCGTCTTCTAGCATCAATGTCACAAACCTATGGTCCCGTGTTCCTGCTCAAACTAGGTTCGAAAAACTTAGTTGTTATCTCTGATCCCGAGCTTGCCACCCAAGTGCTCCACGCACAAGGCGTGGAATTTGGCTCTCGCCCTCGAAACGTTGTGTTTGATATCTTCACGGGGAATGGCCAAGACATGGTTTTCACAGTTTACGGTGACCACTGGCGCAAAATGCGCAGAATAATGACGCTGCCGTTCTTCACCAACAAGGTTGTCCACAACTACAGCAACATGTGGGAGGAAGAAATGGACTTGGTGGTGCGTGACCTCAAAGTTAACGAGAGAGTGAGGAGCGAAGGGTTAGTTATCAGAAAACGGCTTCAGTTGATGCTGTACAATATCATGTACAGGATGATGTTTGATGCCAAGTTTGAGTCTCAAGAGGACCCTTTGTTCATTCAGGCCACCAGGTTTAACTCTGAGAGAAGCCGTTTGGCACAGAGTTTTGAATACAACTACGGGGATTTTATACCATTGCTCAGGCCATTCTTGAGGGGATATCTCAACAAGTGCAAGGACTTGCAATCTAGGAGGCTCGCATTTTTCAACACCCACTACGTTGAGAAAAGAAGACAAATAATGGCTGCCAATGGGGAGAAGCACAAGATCAGCTGTGCAATTGATCACATCATAGATGCTCAGATGAAGGGAGAAATCAGCGAAGAGAATGTGATCTACATCGTAGAAAACATCAACGTTGCAGCAATTGAGACAACACTATGGTCCATGGAGTGGGCAATAGCAGAGTTGGTGAATCATCCAAGCGTCCAAAGCAAGATTCGTGATGAGATATCAAAAGTTCTTAAAGGGGAGCCAGTTACAGAATCCAACCTACACGAGCTACCATACTTGCAAGCCACGGTGAAAGAGACACTGAGACTTCACACCCCAATTCCTCTTTTGGTGCCCCACATGAACCTGGAAGAAGCAAAGCTAGGAGGGTACACTATTCCAAAAGAGTCAAAGGTGGTAGTGAATGCTTGGTGGCTTGCCAACAACCCATCATGGTGGAAGAACCCAGAGGAGTTCAGGCCAGAAAGGTTCTTGGAAGAGGAATGTGCAACAGATGCTGTGGCAGGAGGAAAGGTTGACTTTAGGTTCGTGCCATTTGGTGTGGGAAGGAGGAGTTGCCCTGGGATCATACTTGCATTGCCAATACTGGGACTTGTGATTGCAAAGTTAGTCACAAGTTTTCAGATGAGTGCTCCAGAAGGGACAAAGATTGATGTGAGTGAAAAAGGAGGGCAATTCAGCCTGCACATTGCCAACCACTCCACTGTGTTGTTCCATCCAATAATTAAGACACAATGA 1611 0.4488 MGLQIKKPLFFTLVTISLISFLRSYFSIPFSPCNPSIAIATIIFVLIIYNFSSSSKKHSSTLPPGPLSVPIFGNWLQVGNDLNHRLLASMSQTYGPVFLLKLGSKNLVVISDPELATQVLHAQGVEFGSRPRNVVFDIFTGNGQDMVFTVYGDHWRKMRRIMTLPFFTNKVVHNYSNMWEEEMDLVVRDLKVNERVRSEGLVIRKRLQLMLYNIMYRMMFDAKFESQEDPLFIQATRFNSERSRLAQSFEYNYGDFIPLLRPFLRGYLNKCKDLQSRRLAFFNTHYVEKRRQIMAANGEKHKISCAIDHIIDAQMKGEISEENVIYIVENINVAAIETTLWSMEWAIAELVNHPSVQSKIRDEISKVLKGEPVTESNLHELPYLQATVKETLRLHTPIPLLVPHMNLEEAKLGGYTIPKESKVVVNAWWLANNPSWWKNPEEFRPERFLEEECATDAVAGGKVDFRFVPFGVGRRSCPGIILALPILGLVIAKLVTSFQMSAPEGTKIDVSEKGGQFSLHIANHSTVLFHPIIKTQ 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00265 536 Pfam Cytochrome P450 63 522 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g00265 536 PRINTS E-class P450 group I signature 343 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g00265 536 PRINTS E-class P450 group I signature 385 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g00265 536 PRINTS E-class P450 group I signature 115 136 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g00265 536 PRINTS E-class P450 group I signature 323 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g00265 536 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g00265 536 PRINTS E-class P450 group I signature 210 228 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g00265 536 PRINTS E-class P450 group I signature 467 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g00265 536 PRINTS E-class P450 group I signature 426 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g00265 536 PRINTS E-class P450 group I signature 477 500 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g00265 536 SUPERFAMILY Cytochrome P450 63 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g00265 536 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 470 479 IPR017972 GO:0005506|GO:0016705
Pumo3g00265 536 Gene3D Cytochrome P450 52 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g00265 536 FunFam Trans-cinnamate 4-monooxygenase 52 526 - -
Pumo3g00265 536 PRINTS P450 superfamily signature 386 397 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g00265 536 PRINTS P450 superfamily signature 468 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g00265 536 PRINTS P450 superfamily signature 334 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g00265 536 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 41 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00265 Pumo-Chr3 3371666 3373749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00265 72 531 Monolignol Biosynthesis Gene Families AT2G30490 65.011 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00265 K00487 - gmx:100812188 1005.36