Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00252 ATGGCCGTTGCCGTCGGAAGCATGTTCGACACCAATGGCCTCATCGTCCAAGTCGTCACCGGACGCTGGTTCGTGATGTTCGCCTCCTTTCTAATCATGGCCGCCGCCGGCGCCACCTACATGTTCAGCCTCTACTCCGGCGACATCAAATCCGCCCTCGCCTACGACCAAACCACCTTAAACCTCCTTAGTTTCTTCAAAGACCTGGGCGGCAATGTCGGCGTCCTCTCCGGCCTCATCAACGAGATCAGTCCCCCGTGGGTGGTCCTCGCCATGGGTTCTGTCCTCAACTTCTTCGGCTACTTCATGATATGGCTCGCCGTCACCAAGAAAATACCCAAACCGCACGTGTGGCACATGTGCCTCTACATCTGCATAGGCTCCAACTCTCAGTCCTTCGCCAACACCGGTTCCCTTGTCACGTGCGTCAAGAACTTCCCCGAAAGCCGTGGCGTTGTGCTGGGCATCCTCAAAGGCTACGTTGGTCTCAGTGGAGCCATCATAACACAACTCTACTTTGCTTTCTACTACGACGATTCCAGGTCTTTGATTTTGCTCATAGGGTGGCTCCCTGCGGCTATTTCCTTCCTTTTCCTTCGAACCATTCGCTACATGAAACCGGTTCGACAACCCAATGAGCTAAGTGTTTTCTACAAGTTTTTGTATATCTCGCTTGGCCTTGCTGGGTTTCTTTTGCTCATGATCATAGTTCAGAGGAAAGTGCATTTCTCACAGAGTGAGTATGGAGTCAGTGCTGGGGTTGTGCTTTTCTTACTATTCCTCCCTCTTGCTGTTGTGTTTGTTGAACAATATAAAATCAGAGAGAGTCAAAAGCTAGCATTCATTGACCCCTCCCCGGTCAAGATAGTAGCTGAAACAGAGTCTGCAAATGGTAACACCAACTCGCTTTCGGTTCCAATTTCAAAGATTAACGATGAAACTAGGTGGTGGCAAAAAGTGTTTAGTCCACCGCCTAGAGGTGAGGACTATACTATCCTTCAAGCCCTGTTCAGCTTAGACATGATACTGCTATTCTTCGCTGGCACGTGTGGTGTTGGGGGCACTTTGACCGCAATTGATAACCTTGGTCAGATTGGAACCTCGCTAGGGTACCCCAAGGCTAGCATAAGCACGTTTGTGTCGTTAGTGAGCATTTGGAATTATCTGGGACGCGTTTTTTCTGGGTTTGTTTCCGAACACTTTCTACAAAAGTACAAGTTTCCTCGACCACTCATGCTCACGCTAACCCTGCTCTTATCCTGTGTCGGTCACCTACTGATAGCGTTCGATGTGCCCAATGGACTCTACGTGGCTTCGGTGATCATTGGGTTCTGTTTTGGGGCGCAATGGCCCTTGGTGTTTGCCATAATCTCGGAGCTCTTTGGGCTCAAGTACTATTCAACGTTGTACAACTTTGGCGGTGTAGCGAGTCCAATTGGGCTTTATGTGCTTAATGTGAGGGTAACGGGGCACTTGTATGACAAAGAAGCTCTGAGGCAATTGGCAGCGGCGGGGATCTCAAGAAAGAGTGGCACGGAATTGAATTGTATTGGGTCCAGTTGTTTCAAGTTGTCTTTCATTATTATCACTGCAGCAACTTTTTTTGGCGCCATAATTTCACTCATTTTGGTGGCTAGGACAATTAAGTTCTACAAAGGCGATATATACAAGAGGTACCGGGAGCAAGCCGATGAAGCCACCACTACTGAGATGGCGGTGGTCCAAAACCGCGGCCAGAAAGAACAAGAAGCAAAAGTTGGGGCCTAA 1767 0.4912 MAVAVGSMFDTNGLIVQVVTGRWFVMFASFLIMAAAGATYMFSLYSGDIKSALAYDQTTLNLLSFFKDLGGNVGVLSGLINEISPPWVVLAMGSVLNFFGYFMIWLAVTKKIPKPHVWHMCLYICIGSNSQSFANTGSLVTCVKNFPESRGVVLGILKGYVGLSGAIITQLYFAFYYDDSRSLILLIGWLPAAISFLFLRTIRYMKPVRQPNELSVFYKFLYISLGLAGFLLLMIIVQRKVHFSQSEYGVSAGVVLFLLFLPLAVVFVEQYKIRESQKLAFIDPSPVKIVAETESANGNTNSLSVPISKINDETRWWQKVFSPPPRGEDYTILQALFSLDMILLFFAGTCGVGGTLTAIDNLGQIGTSLGYPKASISTFVSLVSIWNYLGRVFSGFVSEHFLQKYKFPRPLMLTLTLLLSCVGHLLIAFDVPNGLYVASVIIGFCFGAQWPLVFAIISELFGLKYYSTLYNFGGVASPIGLYVLNVRVTGHLYDKEALRQLAAAGISRKSGTELNCIGSSCFKLSFIIITAATFFGAIISLILVARTIKFYKGDIYKRYREQADEATTTEMAVVQNRGQKEQEAKVGA 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00252 588 CDD MFS_Mch1p_like 21 537 - -
Pumo3g00252 588 Pfam Nodulin-like 22 267 IPR010658 -
Pumo3g00252 588 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 23 557 - -
Pumo3g00252 588 FunFam Nodulin family protein 332 553 - -
Pumo3g00252 588 SUPERFAMILY MFS general substrate transporter 22 549 IPR036259 -
Pumo3g00252 588 Gene3D MFS general substrate transporter like domains 337 551 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00252 Pumo-Chr3 3235754 3237981 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00252 6 585 Nodulin-like Gene Family AT2G39210 67.065 0.0 797
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00252 - - gmx:100808975 1059.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g00252 3 3235754 3237981 Pumo3g00252 3 3235754 3237981 ECH
Pumo5g03089 5 79216676 79218900 Pumo3g00252 3 3235754 3237981 ECH
Pumo3g03228 3 59576212 59577189 Pumo3g00252 3 3235754 3237981 ECH