Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00233 ATGGGTGTGGGCATATCATTTCTCATAGCACTAAAAGCAACAACACTCTTGCTATGCTTCGCGTCCCTAAAAAACCTCGGTTTCACTCTTTTCTCTCTCCCCTTCCTCTACGCTTCGCTGATCTCATTCCTAGTCTCAATCGCGTCTCACCCTTCCATCGACCTTCCCATGCTTCTCGGCAAAACCACCGACGGAAGCTTCCCCTTGTTCTCACTCATAATCTTCAGCCCTTACATCTACTTCGTCCGAGTCTTCTCTCTGCTCCGAATACTCCGAAGCGGGGAACCTCCTTACTCTGAAGTTCACGACGGTCTCTATGTCGGTGGCTGGCCATCGTCGCCTCAGAAGCTGCCACCTGGCGACCCTGCCATCGTTGATTGCACGTGCGAGTTCCCCCGTGTGAAGGACTTCACAACGGGGTTGCCTTATAGATGCATTCCGACGTGGGACACAAGGTCTCCTCAACCTGCTGATATCGAATCCGCTGTTAAGTGGGCCTCTCGACAGAGAGACCTCAACAGGCCCATTTTCGTTCACTGTGCTTATGGTCATGGAAGAAGTGTTGCTGTTATGTGTGCACTGTTAGTAGCACTAGGCATCACAGAGGATTGGAAGAATGCTGAGAAGCTGATCAAGCAAAAACGACCTTACATCCAGATGAATGCTCTCCATCGCAAAGCACTTGAAGAATGGTCCAGACACCGATTGTCTGCGCCGAAGAAGTAG 726 0.5083 MGVGISFLIALKATTLLLCFASLKNLGFTLFSLPFLYASLISFLVSIASHPSIDLPMLLGKTTDGSFPLFSLIIFSPYIYFVRVFSLLRILRSGEPPYSEVHDGLYVGGWPSSPQKLPPGDPAIVDCTCEFPRVKDFTTGLPYRCIPTWDTRSPQPADIESAVKWASRQRDLNRPIFVHCAYGHGRSVAVMCALLVALGITEDWKNAEKLIKQKRPYIQMNALHRKALEEWSRHRLSAPKK 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00233 241 Pfam Dual specificity phosphatase, catalytic domain 125 233 IPR000340 GO:0008138|GO:0016311
Pumo3g00233 241 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 81 236 IPR029021 -
Pumo3g00233 241 PANTHER - 3 240 - -
Pumo3g00233 241 Gene3D Protein tyrosine phosphatase superfamily 98 236 IPR029021 -
Pumo3g00233 241 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 157 226 IPR000387 GO:0016311|GO:0016791
Pumo3g00233 241 SMART dsp_5 97 234 IPR020422 GO:0006470|GO:0008138
Pumo3g00233 241 CDD DSP_bac 94 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00233 Pumo-Chr3 2979286 2982809 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00233 141 233 Protein tyrosine phosphatase (PTP) family AT5G56610 31.579 8.99e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00233 - - gmx:100804705 470.7