Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00197 ATGTTATCGGGGTTGATGAACTTATTAAGGGCCTGCTTTCGGCCGGGTTCGGATGGATTTACGCGCACAGGTTCAGATGCTGGAGGTAGACAGGATGGACTGTTGTGGTACAAGGACTCGGGGCAGCACTTGAATGGTGATTTTTCAATGGCTGTAATCCAAGCCAATAACTTGCTGGAAGATCAGAGCCAGATTGAATCAGGCTGTTTGAGCTCCAATGAATCTGGCCCTTATGGTACCTTCATCGGTATCTATGATGGCCATGGAGGGCCTGAGACATCGCGCTTTATCAATGATCACCTATTTCACCATCTCAAGAGATTTACTTCAGAGCAACAATCAATGTCGGTGGATGTAATCCGCAAGGCACTCCAAGCAACAGAAGAGGGGTTTATCTCAGTGGTTGCCAGACAGTGGTCTCTGTCACCACAAATTGCAGCTGTTGGGTCATGCTGTCTTGTTGGTGTTATTTGTAATGGAACCCTTTATATAGCAAACCTTGGGGATTCCCGGGCAGTTTTGGGAAGAGCAGTCAAGGCAACTGGCGAGGTTTTAGCCATGCAATTATCAGCAGAGCACAATGCATCAATAGAGTCTGTAAGACAGGAGCTGCATGCTTTGCATCCTGATGACCCAAATATCGTGGTTTTAAAGCATAATGTATGGCGTGTGAAGGGCCTTATTCAAGTTTCTAGATCTATTGGTGATGTATATTTGAAAAAGGCTGAGTTCAATAGAGAACCACTATATGCTAAGTTTCGACTTCGTGAACCATTCAAGATGCCAATTCTGAGCTCAGAACCATCAATATCAGTGCATCATCTGCAGCCACATGATCAATTTATTATATTTGCATCTGATGGACTCTGGGAGCACCTTAGCAATCAAGACGCAGTTGATATAGTTCAAAACAGTCCCCGCAGTGGAAGCGCAAGGAGGCTGGTAAAAGCTGCACTTCAAGAAGCCGCAAAGAAGAGGGAAATGAGATATTCGGATTTAAAGAAAATTGACCGCGGAGTTCGTCGTCATTTCCATGATGATACCACGGTGATTGTTGTCTATCTTGACTCAAATCTCGTGAGCAGGGCAAGCACTGGGAAGTTCCCTGGTATTTCTGTTAGAGGGGGTGGTATTAACCTGCCTCATAACACACTGGCACCTTGTACCACACCAACAGAGATTGGTGGTACCTGA 1194 0.4548 MLSGLMNLLRACFRPGSDGFTRTGSDAGGRQDGLLWYKDSGQHLNGDFSMAVIQANNLLEDQSQIESGCLSSNESGPYGTFIGIYDGHGGPETSRFINDHLFHHLKRFTSEQQSMSVDVIRKALQATEEGFISVVARQWSLSPQIAAVGSCCLVGVICNGTLYIANLGDSRAVLGRAVKATGEVLAMQLSAEHNASIESVRQELHALHPDDPNIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNREPLYAKFRLREPFKMPILSSEPSISVHHLQPHDQFIIFASDGLWEHLSNQDAVDIVQNSPRSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDTTVIVVYLDSNLVSRASTGKFPGISVRGGGINLPHNTLAPCTTPTEIGGT 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00197 397 CDD PP2Cc 48 355 IPR001932 -
Pumo3g00197 397 SMART PP2C_4 39 353 IPR001932 -
Pumo3g00197 397 PANTHER PROTEIN PHOSPHATASE 45 354 IPR015655 GO:0004722|GO:0006470
Pumo3g00197 397 FunFam Phosphatase 2C family protein 36 365 - -
Pumo3g00197 397 Pfam Protein phosphatase 2C 77 324 IPR001932 -
Pumo3g00197 397 ProSiteProfiles PPM-type phosphatase domain profile. 47 355 IPR001932 -
Pumo3g00197 397 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Pumo3g00197 397 SUPERFAMILY PP2C-like 55 356 IPR036457 -
Pumo3g00197 397 Gene3D - 37 365 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00197 Pumo-Chr3 2479498 2484269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00197 1 393 PP2C-type Phosphatase Gene Family AT4G38520 76.590 0.0 651
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00197 - K01102 gmx:100794801 779.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g00197 3 2479498 2484269 Pumo3g00197 3 2479498 2484269 ECH