Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00174 ATGCTTTTCAGAGTAACAATTCCTCAATACTTATTTCTTCTTGGACTTGAATATACGTCTGCCACATTCTCATGTGCTTTCCTCAACATGGTGCCTGTATTTACGTTCATTATGGCAGTGCCATTTGGGATAGAGAAGGTGAACATGCAAAGCAAGAGTGGTAAAGCCAAAGTCATGGGAACTTTTGTGTGCATTAGTGGAGCTTTGTTATTGGTCCTTTATAAAGGAATGCCCCTTATCAACCCACAATCTCAACACATAGCAAACAAAATTAAAAACACACCTCCAACTGCCAAGTTAGAGAAATGGATTATAGGTTCCATACTTCTGACTCTAGGTTGCCTCCTGTGGTCTTCATGGTTCATTATACAAGCAAAGATTAGCAAAAAATACCCATGTCAATACTCCAGCACAGCTATTTTGTCACTTTTTGCTGCCATTCAATCAGCAATATTAACTTTGATCATCAAGAGAAATAATGCTTCATGGATTCTCAAAGGAAAGCTTGAAATATTGAGTGTTGTATATGCTGGATTGATTGGGTCGGGCTTGTGCTATGTGGCAATGTCATGGGGTGTCAAACAAAGGGGTCCAGTTTTTACCGCAGCTTTTACCCCCCTTATGCAGATATTTGTGGCCATGCTTGATTTCTCTGTACTAAAGGAGGAAATTTACCTGGGAAGTGTTGCAGGATCTGCCTTGGTTATTGCTGGCATGTATATTCTTCTATGGGGAAAAAGCAAAGAGGAAGGGTAA 756 0.4008 MLFRVTIPQYLFLLGLEYTSATFSCAFLNMVPVFTFIMAVPFGIEKVNMQSKSGKAKVMGTFVCISGALLLVLYKGMPLINPQSQHIANKIKNTPPTAKLEKWIIGSILLTLGCLLWSSWFIIQAKISKKYPCQYSSTAILSLFAAIQSAILTLIIKRNNASWILKGKLEILSVVYAGLIGSGLCYVAMSWGVKQRGPVFTAAFTPLMQIFVAMLDFSVLKEEIYLGSVAGSALVIAGMYILLWGKSKEEG 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00174 251 PANTHER WAT1-RELATED PROTEIN 2 250 IPR030184 GO:0016020|GO:0022857
Pumo3g00174 251 Pfam EamA-like transporter family 105 243 IPR000620 GO:0016020
Pumo3g00174 251 SUPERFAMILY Multidrug resistance efflux transporter EmrE 4 75 - -
Pumo3g00174 251 SUPERFAMILY Multidrug resistance efflux transporter EmrE 144 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00174 Pumo-Chr3 2221935 2223102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00174 30 250 Nodulin-like Gene Family AT4G01440 49.107 4.73e-74 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00174 - - gmx:100806247 464.151