Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00162 ATGCAACTAAGTTATTTAAATGAACCATCAGTTTTATTCAACCTGCAATATAGATACAATCAAAATATGATCTATACGAAAGCTGGGCCTGTATTGGTTGCTGTAAATCCCTTTAAGAAAGTTCCTCTGTATGGTAATGACTATATTGAAGCCTACAAGTGTAAAGCAATTGAAAGCCCTCATGTATATGCAATTACTGACACAGCCATCCGAGAAATGATACGAGACGAAGTGAATCAATCTATAATTATAAGTGGTGAGAGTGGAGCAGGGAAGACTGAGACAGCAAAAATAGCAATGCAGTACTTGGCTGCCCTTGGTGGTGGAAGTGGAATAGAGAATGAGATATTAAAGACTAATCCAATACTAGAAGCCTTTGGTAATGGAAAAACATTAAGAAATGACAACTCAAGTCGTTTTGGAAAGCTCATTGAGATTCACTTCAGTGAAACTGGAAAAATATCCGGTGCTAATATTCAAACATTTTTGCTGGAAAAGTCTAGAGTAGTCCAATGCAATGAAGGGGAAAGGTCATATCATATATTTTATCAGCTATGTGCTGGAGCACCATCATCTCTTAGGGAGAAGCTAAATCTACTAAGTGCGGAAGACTATAAATACCTGAGGCAGAGCAATTGTTATTCAATTACCGGTGTCGATGATGCAGAAGAATTTCGCATAGTCAAGGAAGCTCTGGATGTTGTCCACATTAGCAAAGGAGACCAGGAGAATGTATTTGCAATGCTTGCTGCAGTATTATGGTTAGGAAACATATCATTTACTGTGGTCGATAATGAAAATCATGTTCAAGCAGTTGAGGATGAGGGTCTGTTCACTGTTGCTAAGTTGATTGGATGTGAAATTGAAGACCTGAAGTTGACTTTATCAACTCGCAATATGAAAGTTGGTAATGATAATATTGTCCAGAAGTTGACACTATCTCAGGCTATTGATGCGAGAGATGCTTTGGCGAAGTCAATATATGCATGTCTGTTTGATTGGTTGGTTGAACAAATAAACAAATCCCTTGCGGTTGGCAAAAGACGAACTGGCAGATCAATCAGCATTCTGGATATTTATGGCTTTGAGTCATTCAATAGGAACAGTTTTGAGCAGTTCTGCATAAATTATGCAAATGAGAGATTACAGCAACACTTCAATCGTCATTTATTCAAGTTAGAACAGGAGGAATATATCCAAGATGGCATTGATTGGGCTAAAGTTGAATTTGAAGACAATCAAGATTGCCTTAATCTTTTTGAAAAGAAACCATTGGGGCTACTGTCCCTGTTAGATGAAGAGTCAACTTTCCCTAATGGCACAGATTTAACGTTTGCTAACAAGCTTAAGCAGCATTTGAATTCCAATTCATGCTTCAAAGGAGAACGAGAAAAAGCCTTTACTGTGCGTCATTATGCAGGGGAGGTCACTTATGATACATCTGGATTCCTGGAAAAGAACAGGGACCTATTGCACTTGGACTCCATCCAACTTCTATCCTCAAGCAAATGTCATCTTCCTAAGTTATTTGCATCCCATATGCTAACTCAGTCTGAGAAGCCTGTAGTAGGTCCCTTACATAAGTCAGGTGGGGCAGATTCCCAAAAGCTAAGTGTTGCCACAAAATTCAAGGGACAATTGTTCCAATTGATGCAACGTTTAGAGAGTACGACACCACATTTTATACGCTGCATTAAGCCCAATAACCTCCAATCACCTGGATCATATGAGCAAAGCCTTGTACTGCAGCAGTTGAGATGTTGTGGGGTCCTGGAAGTGGTTCGAATATCAAGATCGGGCTTTCCAACTAGAGTATCTCACCAAAAGTTTGCCAGAAGATATGGTTTCCTTCTCCTTGAAAATGTTGCCTCTCAGGATCCACTTAGTGTTTCAGTTGCTATTCTTCATCAGTTCAACATTTTACCTGAGATGTTTCAAGTTGGCTACACAAAACTATTCTTCCGAACAGGGCAGATTGGAGTGCTTGAAGATACCAGAAATCGTACCCTGCATGGAATTTTACGTGTGCAAAGTTGCTTCAGGGGTTACCGAGCTCGTTGTTATCGCAAGGAGCTTCGGAGAGGAATCACTACTCTCCAATCTTGTATTTCCTTTTTGTCACCTAATTCTTTCAGCCTATCACATTCCTTGAGAAGTGTAACCAACTCACATTATTTTTTACCCGTTCATGCAGTCATTAGAGGAGACAAAAGCAGAAAGGAATATGCAGCTTTGCTTCAGAGACATAGGGCTGCTGTTATTATACAGAAGCGGATGAAAACAGTACTTGCAAGGAACAGAATGAAAAGTATTAATGATGCTGCAGTTGTCATACAATCATTTATTCGTGGTTGGTTAGTCAGAAGATGCTCAGGAGATATAGGATTATCAAAAGCCCAAGGCGTGAAGACGAATGAGTCAGATGAGGTTCTGGTGAAGTCGTCTTTCCTGGCTGAATTACAGCGCCGGGTACTTAAGGCAGAAGCTGCCCTGAGAGAGAAAGAAGAGGAAAATGACATTCTTCACCAACGCCTTCAACAGTATGAGAGCAGATGGTCTGAATATGAATTGAAGATGAAGTCCATGGAAGAAGTATGGCAGAAACAAATGAGATCCCTACAATCTAGCCTCTCCATTGCAAAGAAGAGCCTGGCTATGGATGATTCTGAAAGAAATTCAGATGCTTCTGTTAATGCAAGTGATGACAGGGATTTCAGCTGGGATGTAGGAACCAATCACCGGCGCCAAGAAAGCAATGGGGCAAGATCAATGAGTGCTGGTTTGAGTGTTATAAGTCGGTTGGCTGAAGAATTTGAGCAGAGGAGTCAAGTGTTTGGTGATGATGCTAAATTCTTGGTAGAGGTAAAATCTGGTCAAGTTGAAGCCAGTTTGAACCCAGATAGAGAGCTTAGAAGGTTAAAACAGATGTTTGAAGCTTGGAAAAAGGATTATGGTGCTAGACTACGTGAAACAAAGGTCATTTTACATAAACTTGGAAGTGAAGATGGATCAATTGAGAAAGTGAAGAAAAGTTGGTGGGGAAGAAGGAATAGTACAAGAATAAGTTGA 3069 0.4014 MQLSYLNEPSVLFNLQYRYNQNMIYTKAGPVLVAVNPFKKVPLYGNDYIEAYKCKAIESPHVYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSGIENEILKTNPILEAFGNGKTLRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCNEGERSYHIFYQLCAGAPSSLREKLNLLSAEDYKYLRQSNCYSITGVDDAEEFRIVKEALDVVHISKGDQENVFAMLAAVLWLGNISFTVVDNENHVQAVEDEGLFTVAKLIGCEIEDLKLTLSTRNMKVGNDNIVQKLTLSQAIDARDALAKSIYACLFDWLVEQINKSLAVGKRRTGRSISILDIYGFESFNRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVEFEDNQDCLNLFEKKPLGLLSLLDEESTFPNGTDLTFANKLKQHLNSNSCFKGEREKAFTVRHYAGEVTYDTSGFLEKNRDLLHLDSIQLLSSSKCHLPKLFASHMLTQSEKPVVGPLHKSGGADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNLQSPGSYEQSLVLQQLRCCGVLEVVRISRSGFPTRVSHQKFARRYGFLLLENVASQDPLSVSVAILHQFNILPEMFQVGYTKLFFRTGQIGVLEDTRNRTLHGILRVQSCFRGYRARCYRKELRRGITTLQSCISFLSPNSFSLSHSLRSVTNSHYFLPVHAVIRGDKSRKEYAALLQRHRAAVIIQKRMKTVLARNRMKSINDAAVVIQSFIRGWLVRRCSGDIGLSKAQGVKTNESDEVLVKSSFLAELQRRVLKAEAALREKEEENDILHQRLQQYESRWSEYELKMKSMEEVWQKQMRSLQSSLSIAKKSLAMDDSERNSDASVNASDDRDFSWDVGTNHRRQESNGARSMSAGLSVISRLAEEFEQRSQVFGDDAKFLVEVKSGQVEASLNPDRELRRLKQMFEAWKKDYGARLRETKVILHKLGSEDGSIEKVKKSWWGRRNSTRIS 1022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00162 1022 SMART iq_5 668 690 IPR000048 GO:0005515
Pumo3g00162 1022 SMART iq_5 747 769 IPR000048 GO:0005515
Pumo3g00162 1022 SMART iq_5 770 792 IPR000048 GO:0005515
Pumo3g00162 1022 FunFam Myosin heavy chain 177 233 - -
Pumo3g00162 1022 Gene3D Myosin VI head, motor domain, U50 subdomain 238 535 - -
Pumo3g00162 1022 ProSiteProfiles IQ motif profile. 722 751 IPR000048 GO:0005515
Pumo3g00162 1022 Gene3D - 363 557 - -
Pumo3g00162 1022 Gene3D Kinesin motor domain 2 596 IPR036961 -
Pumo3g00162 1022 SMART MYSc_2a 2 668 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo3g00162 1022 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 738 789 IPR027417 -
Pumo3g00162 1022 FunFam Unconventional myosin-XIX 365 557 - -
Pumo3g00162 1022 Gene3D - 746 791 - -
Pumo3g00162 1022 ProSiteProfiles IQ motif profile. 771 800 IPR000048 GO:0005515
Pumo3g00162 1022 Coils Coil 817 865 - -
Pumo3g00162 1022 PANTHER MYOSIN 1 1014 - -
Pumo3g00162 1022 CDD MYSc_Myo8 9 655 IPR036022 -
Pumo3g00162 1022 Gene3D - 177 236 - -
Pumo3g00162 1022 ProSiteProfiles Myosin motor domain profile. 1 667 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo3g00162 1022 ProSiteProfiles IQ motif profile. 671 698 IPR000048 GO:0005515
Pumo3g00162 1022 MobiDBLite consensus disorder prediction 884 898 - -
Pumo3g00162 1022 MobiDBLite consensus disorder prediction 884 903 - -
Pumo3g00162 1022 Pfam IQ calmodulin-binding motif 673 688 IPR000048 GO:0005515
Pumo3g00162 1022 Pfam IQ calmodulin-binding motif 749 769 IPR000048 GO:0005515
Pumo3g00162 1022 Pfam IQ calmodulin-binding motif 773 789 IPR000048 GO:0005515
Pumo3g00162 1022 Gene3D - 600 707 - -
Pumo3g00162 1022 PRINTS Myosin heavy chain signature 25 44 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo3g00162 1022 PRINTS Myosin heavy chain signature 79 104 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo3g00162 1022 PRINTS Myosin heavy chain signature 121 148 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo3g00162 1022 PRINTS Myosin heavy chain signature 353 381 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo3g00162 1022 PRINTS Myosin heavy chain signature 406 434 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo3g00162 1022 Pfam Myosin head (motor domain) 2 655 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo3g00162 1022 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 703 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00162 Pumo-Chr3 2098099 2108790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00162 1 1020 Myosins gene family AT1G50360 79.159 0.0 1657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00162 - - gmx:100782618 1899.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g00162 3 2098099 2108790 Pumo3g00162 3 2098099 2108790 ECH