Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00144 ATGCAGCAGCCGGAGGCACCACCCGGAATGGCTCGCCGCAGAAGGCGACGGAGCTCCGGTTTCTGTGGCAGTCTTAGGGCTCAGGCTCAGCCACAAGAAGAAGAAGTGCCAACGCCTATGACTGAGTCTGACCAGTTCTATTTCAATTGGTATGCTCACATTGACGTTCACGAAGAGATGATCAAGGATCGTGTGCGGACTGATGCTTATAAGAATGCAATAATGCGTCATAAGGATTTTATTAGAGGCAAAGTTGTACTTGATGTTGGATGTGGTACTGGCATCCTTGCTATATTTTGTGCTCAGGCTGGCGCAAGGCGGGTCTATGCAGTTGAAGCAAGTAACATTGCCCTGCAGCAGGCAATCCGTGTTGTTGAAGCTAACAATCTTTCAAACATTATCATGGTATTGCACGGACGAGTTGAGGATGTTGAAATCAATGAAAAGGTTGATGTTATAATTTCAGAATGGATGGGCTATATGCTTCTATGTGAGAGCATGCTTGGAAGTGTTATTACTGCCAGAGATCGCTGGCTCAAGCCTGGAGGTCTAGTTCTTCCTTCAAAGGCAACGTTGTACATGGCTCCTTTTACACATGCAAAAAAATACCAGGAAAGCATTGACTTCTGGCGCAGTGTTTATGGAATTAATATGTCTGCCATGATACCATTAGCAAAACAGTGTGCATTCGTGGAACCTTCTGTGGAGACAATTACTCGTGAAAATGTTTTGGCATGGCCACAAGTGGTGAAATGTCTGAACTGTTATTCTGTTACCATTCCTGAGCTAGAATATATAACAACAAGGTTTAAGTTCAACTCATTGGTGAGAGCACCGCTACATGGTTTTGCATTTTGGTTTGATGTTGAATTTACTAGGCTACTATCACCAGAGCCAATAAGTTTTCAGTTATCAACTTCAGCTGTTGCCGATCATCCAGTGGATAGTCAGAGACAAAATTTGAGAGACCCTACACTGCTCCTGTCCACTGCACCTGAAGCCCTTCCAACACATTGGCAACAGACCTTGATATACTTTTATGAGCCAATAGAACTGGAACAAGATCAACTTATTGAAGGAAAAGTGACATTATCACAAAGCCAAGGAAATCACCGGAATGTGAATATTGAACTTGAATATGCTACAGGAGGTCAATCATATGTGAAAGTGTCCGTTATGTGA 1182 0.4332 MQQPEAPPGMARRRRRRSSGFCGSLRAQAQPQEEEVPTPMTESDQFYFNWYAHIDVHEEMIKDRVRTDAYKNAIMRHKDFIRGKVVLDVGCGTGILAIFCAQAGARRVYAVEASNIALQQAIRVVEANNLSNIIMVLHGRVEDVEINEKVDVIISEWMGYMLLCESMLGSVITARDRWLKPGGLVLPSKATLYMAPFTHAKKYQESIDFWRSVYGINMSAMIPLAKQCAFVEPSVETITRENVLAWPQVVKCLNCYSVTIPELEYITTRFKFNSLVRAPLHGFAFWFDVEFTRLLSPEPISFQLSTSAVADHPVDSQRQNLRDPTLLLSTAPEALPTHWQQTLIYFYEPIELEQDQLIEGKVTLSQSQGNHRNVNIELEYATGGQSYVKVSVM 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00144 393 CDD AdoMet_MTases 86 186 - -
Pumo3g00144 393 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 44 393 IPR025799 GO:0016274|GO:0018216
Pumo3g00144 393 Gene3D Vaccinia Virus protein VP39 40 187 IPR029063 -
Pumo3g00144 393 MobiDBLite consensus disorder prediction 1 39 - -
Pumo3g00144 393 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 39 382 IPR025799 GO:0016274|GO:0018216
Pumo3g00144 393 FunFam Protein arginine N-methyltransferase 6 40 187 - -
Pumo3g00144 393 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 51 384 IPR029063 -
Pumo3g00144 393 Pfam Ribosomal protein L11 methyltransferase (PrmA) 83 157 - -
Pumo3g00144 393 Gene3D - 189 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00144 Pumo-Chr3 1932267 1942479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00144 47 383 C2H2 Transcription Factor Family AT3G12270 34.324 1.01e-62 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00144 K11437 - gmx:100795672 677.937