Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00109 ATGGCTCTCGAGGTTGCTGTTAAGGCTGCTGTTGGTGCTCCAAATGTTATCGGAGATTGTCCATTTTCCCAAAGGGTCCTCTTAACTATAGAGGAGAAGAAAATCTCTTACAAACTCCACCTCATCGATCTCAGTAACAAACCCAAATGGTTTTGGGGTGTAAACCCTGAAGGGAAGGTGCCAGTGGTTCTTTTTGATGGCAAATGGGTGGCTGATTCTGATGTAATTGTGGGGATACTTGAGGAAAAGTACCCGGAACCCTCTCTCATCACTCCTCCTGAATTTGCCTCCGTGGGATCAAAGATATTTGGGTCTTTTGTGAGTTTTCTGAAGAGCAAGGATCCAAACGATGGAACAGAGCAAGCGTTGGTTGCTGAATTGAATGCTTTGGATGAACATCTCAAGGCCCATGGTCCATATGTTGCTGGAGAGAAAGTCACCGCGGTTGATCTGAGTTTGGCACCAAAACTGTACCATCTTGTGGTAGCACTGGGTCACTTCAAGAAGTGGAGTATTCCAGAAAGTTTGGCACATGTCCACAACTACACTAAGCTGCTCTTCTCCCGGGAGTCATTTGAGAAAACCAAGACTCCAAAAGAGGAATATGTTATTGCTGGATGGGCGCCTAAGGTGAATGCTTGA 642 0.4579 MALEVAVKAAVGAPNVIGDCPFSQRVLLTIEEKKISYKLHLIDLSNKPKWFWGVNPEGKVPVVLFDGKWVADSDVIVGILEEKYPEPSLITPPEFASVGSKIFGSFVSFLKSKDPNDGTEQALVAELNALDEHLKAHGPYVAGEKVTAVDLSLAPKLYHLVVALGHFKKWSIPESLAHVHNYTKLLFSRESFEKTKTPKEEYVIAGWAPKVNA 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00109 213 Pfam Glutathione S-transferase, C-terminal domain 120 182 - -
Pumo3g00109 213 SFLD Main (cytGST) 19 186 - -
Pumo3g00109 213 Pfam Glutathione S-transferase, N-terminal domain 19 87 IPR004045 -
Pumo3g00109 213 SUPERFAMILY Thioredoxin-like 19 87 IPR036249 -
Pumo3g00109 213 CDD GST_C_DHAR 89 210 - -
Pumo3g00109 213 FunFam Glutathione S-transferase DHAR3 chloroplastic 1 89 - -
Pumo3g00109 213 CDD GST_N_family 20 77 - -
Pumo3g00109 213 Gene3D - 90 213 - -
Pumo3g00109 213 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 10 88 IPR004045 -
Pumo3g00109 213 SFLD Glutathione Transferase (cytosolic) 19 186 IPR040079 -
Pumo3g00109 213 FunFam Glutathione S-transferase DHAR3, chloroplastic 90 213 - -
Pumo3g00109 213 SUPERFAMILY GST C-terminal domain-like 83 204 IPR036282 -
Pumo3g00109 213 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 1 210 IPR044627 GO:0033355|GO:0045174|GO:0098869
Pumo3g00109 213 Gene3D Glutaredoxin 1 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00109 Pumo-Chr3 1443380 1449357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00109 1 213 Glutathione S-transferase Gene Family AT1G75270 75.701 8.15e-117 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00109 K21888 - gmx:100306061 409.068