Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00102 ATGATCTCAAACTCGGACCCTGTAGAACCAGTCACGGTGGCCACCGCCGGCGCCGCCGACACCGACGCCGCCGTTGCAACTGCCGCTTCTTCTTCCAATGAAGATCAACCTGCACCGCCGGCGGCACCGAACATTGTGATGTCCTCCAGAGATCACGATTCTCTCTTCAGCGGTGGCGGCATGAGCTTTCTCTCTGGAAGCCGAAATGGAAGGTTCAGCTATGGATATTCCAGTTTCAAGGGTAAAAGGTCATCAATGGAGGATTTCTTTGAGACCAGAATATCAGAGGTTGATGGTCAGACGGTTGCGTTTTTTGGTGTCTTCGATGGTCATGGAGGTTCCCGGACTGCAGAATATCTGAAAAATAATCTGTTTAAGAATTTGAGTAGCCACCCTGACTTTATCAAAGACACAAAGACTGCTATAGTTGAAGCATTTAAACAGACAGATGTTGACTACCTAAATGAGGAAAAGGGGCATCAAAGGGATGCTGGGTCAACTGCATCAACAGCTATGTTGTTGGGGGACCGGATTGTTGTTGCAAATGTTGGTGATTCCAGAGTAGTTGCATGTAGAGCTGGTTCAGCTGTTCCTTTGTCTATCGATCACAAACCTGATAGATCTGATGAACGTCAAAGGATTGAACAGGCTGGGGGATTCATAATTTGGGCTGGAACATGGAGAGTTGGTGGTGTTCTTGCTGTTTCCCGTGCATTTGGAGACAAACTTCTTAAGCCGTATGTTGTTGCTGACCCAGAAATTCAGGAGGAAGAAATTGATGGTGTAGATTTTATTATAATTGCTAGTGATGGCCTTTGGAATGTCATATCAAACAAGGAGGCCGTGTCTTTAGTACAAAATATCACAGATGCAGAAGTGGCGTCCAGAGAACTTATAAAAGAAGCTTATGCACAAGGAAGCTCAGATAACATAACTTGTGTTGTTGTTCGATTTGATCTATCCTGA 966 0.4545 MISNSDPVEPVTVATAGAADTDAAVATAASSSNEDQPAPPAAPNIVMSSRDHDSLFSGGGMSFLSGSRNGRFSYGYSSFKGKRSSMEDFFETRISEVDGQTVAFFGVFDGHGGSRTAEYLKNNLFKNLSSHPDFIKDTKTAIVEAFKQTDVDYLNEEKGHQRDAGSTASTAMLLGDRIVVANVGDSRVVACRAGSAVPLSIDHKPDRSDERQRIEQAGGFIIWAGTWRVGGVLAVSRAFGDKLLKPYVVADPEIQEEEIDGVDFIIIASDGLWNVISNKEAVSLVQNITDAEVASRELIKEAYAQGSSDNITCVVVRFDLS 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00102 321 PANTHER PROTEIN PHOSPHATASE 47 318 IPR015655 GO:0004722|GO:0006470
Pumo3g00102 321 Gene3D - 66 320 IPR036457 -
Pumo3g00102 321 FunFam probable protein phosphatase 2C 59 65 321 - -
Pumo3g00102 321 ProSiteProfiles PPM-type phosphatase domain profile. 73 318 IPR001932 -
Pumo3g00102 321 Pfam Protein phosphatase 2C 74 311 IPR001932 -
Pumo3g00102 321 CDD PP2Cc 72 318 IPR001932 -
Pumo3g00102 321 MobiDBLite consensus disorder prediction 25 47 - -
Pumo3g00102 321 SUPERFAMILY PP2C-like 66 319 IPR036457 -
Pumo3g00102 321 ProSitePatterns PPM-type phosphatase domain signature. 104 112 IPR000222 GO:0043169
Pumo3g00102 321 SMART PP2C_4 62 316 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00102 Pumo-Chr3 1357843 1364014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00102 45 321 PP2C-type Phosphatase Gene Family AT1G43900 74.007 8.60e-157 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00102 K17506 - gmx:100776867 571.237