Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00093 ATGTCATCTCGCATTGTTGCGGAGAATTCATTATCGGTCACCAATGTGACCACGCCATATTTTGACTTAATGGAACTGGACGACCTCACGCGCCGCCCAGCCGCCTCCGAAATGCCCACGCTTGGCCAGCTCCTCAAGCACGTCGGAGACGCGCGGAAGGAGGCCGCCGGCGACGGAAGCGAGACGCCGGTGCACCACGCCCTCGACATCGCCGACGCCGCCGGAATTGAGCCTCGCTCGCTGCCGTTCGTCCTCTCCTTCACCAACCTCACCTACAGCGTCAAGGTTCACCGCAAAATGAGCCTCTCCTCAATCTTCCCCCGCCGTAGCAACCGCCTCGGCGCGGCGGGGGTGGCTGAGGGGCCGGCGGTCGGCGAGAGCATGTTCACGCGGACGAAGACGCTGCTGAACGACATCTCCGGAGAGGCGCGCGACGGCGAGATCATGGCGGTCCTCGGCGCCAGCGGTTCGGGAAAGTCAACCCTAATCGACGCGCTGGCGAACAGAATCGCGAAGGGAAGTCTAAAAGGCACGGTGGCGCTGAACGGCGAAGCGCTGGAATCGCGTCTTCTGAAGGTGATTTCCGCGTACGTGATGCAAGACGACCTTCTCTTCCCAATGCTCACTGTGGAAGAGACTCTCATGTTCGCGGCGGAGTTCCGACTTCCTCGCACTCTCTCAAAGTCGAAGAAAAGCGCACGCGTGCAGGCACTCATCGACCAGCTAGGTCTCCGGAACGCCGCGAAAACGGTCATCGGAGACGAAGGCCACCGCGGAGTCTCCGGCGGAGAGCGGCGGAGAGTGTCGATCGGCATCGACATAATCCACGACCCGATCCTTCTATTCCTGGACGAGCCAACCTCAGGACTTGATTCGACGAGCGCGTTCATGGTGGTGAAGGTGCTGCAGAGAATCGCACAGAGCGGAAGCATCGTCATCATGTCGGTTCACCAACCGAGTTACCGAATCCTAGGGCTTCTCGACCGCATGATCTTCTTATCACGCGGCCAAACCGTTTACAGCGGTTCACCCTCGCAGTTACCACTTTACTTCTCCGAGTTCGGTCATCCAATTCCAGAAACCGATAACAGAACGGAGTTCGCGTTGGACCTGATTCGCGAGCTCGAAGGTTCTCCCGGCGGAACCAAGAGTTTAGTCGAGTTCAACAAGTCGTGGCAGAGCATGACGAAGCACCACCAAACGACAACGACAACGACAAATACAACGGACGCGGAACGAAACGGCTTGTCGTTGAAGGAAGCAATAAGCGCGAGCATTTCGAGAGGGAAACTGGTTTCGGGCGCTACCAACACTAACCCAAACCCGTCCTCTATGGTGCCAACTTTTGCGAATCCGTTTTGGGTTGAGATGGCCACGCTGTCGAAACGCTCGTTTTTGAACTCCAGGAGAATGCCCGAGTTGTTTGGGATTAGATTGGGTGCGGTCATGGTCACGGGGTTCATTCTTGCAACCATGTTTTGGCAACTCGATGACTCTCCCAAAGGAGTGCAAGAGAGGCTGGGATTCTTCGCCTTTGCGATGTCAACCACTTTTTACACTACCGCTGACGCGCTTCCTGTGTTTCTTCAAGAACGCTACATTTTCATGAGGGAAACTGCTTACAACGCATATCGCAGGTTGTCGTATTTGGTTTCGCATGCGCTCGTTGCGTTGCCTGCCTTAGCGTTTTTCTCGCTGGCGTTCGCGGCAGCCACTTTTTGGGCCGTGGGCCTGGATGGTGGAATTTCGGGCTTTTTGTTTTACTTTCTAATCATATTCGCTTCCTTTTGGGCCGGGAACTCGTTCGTGACGTTCCTTTCGGGTGTGGTGCCTCACGTGATGCTGGGTTACACTATCGTGGTTGCGATTCTCGCATATTTCTTGCTGTTCAGTGGATTCTTCATTAACAGGGACAGGATTCCGAGTTACTGGATTTGGTTCCATTACTTGTCGTTGGTGAAATACCCATACGAAGCTGTTTTGCAGAACGAGTTCGATGACCCGGTGAAGTGCTTCGTGAGGGGGGTGCAGATTTTCGATAACACGCCACTTGGGTCGGTGCCGGAGGCTCTGAAGTTGAAGCTGTTGGACAGCATGAGCAACACGCTGGGAATGAAGATCACGAGCTCCACGTGTTTGACGACGGGTGCGGATATTTTGCAACAAAATGGGGTCACTGATTTGAGCAAGTGGAACTGCTTGTGGATCACTGTGGCTTGGGGATTCTTCTTTAGGTTCCTCTTCTACTTGTCATTGTTGGTGGGCAGCAAGAACAAGAGGAGGTGA 2286 0.5494 MSSRIVAENSLSVTNVTTPYFDLMELDDLTRRPAASEMPTLGQLLKHVGDARKEAAGDGSETPVHHALDIADAAGIEPRSLPFVLSFTNLTYSVKVHRKMSLSSIFPRRSNRLGAAGVAEGPAVGESMFTRTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKGSLKGTVALNGEALESRLLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKSARVQALIDQLGLRNAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAFMVVKVLQRIAQSGSIVIMSVHQPSYRILGLLDRMIFLSRGQTVYSGSPSQLPLYFSEFGHPIPETDNRTEFALDLIRELEGSPGGTKSLVEFNKSWQSMTKHHQTTTTTTNTTDAERNGLSLKEAISASISRGKLVSGATNTNPNPSSMVPTFANPFWVEMATLSKRSFLNSRRMPELFGIRLGAVMVTGFILATMFWQLDDSPKGVQERLGFFAFAMSTTFYTTADALPVFLQERYIFMRETAYNAYRRLSYLVSHALVALPALAFFSLAFAAATFWAVGLDGGISGFLFYFLIIFASFWAGNSFVTFLSGVVPHVMLGYTIVVAILAYFLLFSGFFINRDRIPSYWIWFHYLSLVKYPYEAVLQNEFDDPVKCFVRGVQIFDNTPLGSVPEALKLKLLDSMSNTLGMKITSSTCLTTGADILQQNGVTDLSKWNCLWITVAWGFFFRFLFYLSLLVGSKNKRR 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00093 761 FunFam ABC transporter G family member 6 125 351 - -
Pumo3g00093 761 Pfam ABC-2 type transporter 317 376 IPR043926 GO:0140359
Pumo3g00093 761 ProSitePatterns ABC transporters family signature. 260 274 IPR017871 GO:0005524|GO:0016887
Pumo3g00093 761 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 119 360 IPR003439 GO:0005524
Pumo3g00093 761 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 66 749 - -
Pumo3g00093 761 Pfam ABC transporter 136 288 IPR003439 GO:0005524
Pumo3g00093 761 Gene3D - 126 350 IPR027417 -
Pumo3g00093 761 SMART AAA_5 145 337 IPR003593 GO:0016887
Pumo3g00093 761 Pfam ABC-2 type transporter 459 665 IPR013525 GO:0016020|GO:0140359
Pumo3g00093 761 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 131 348 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00093 Pumo-Chr3 1239365 1241650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00093 135 347 Calmodulin-binding Proteins AT2G36910 29.091 5.32e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00093 K05681 - gmx:100803658 1340.48