Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00073 ATGGCAGCAACAGGGTCTTCAGTGATTGGGGTGATTGATGGTAAATTTGAAAGCGGGTATATAGTTACTGTTACAATGGGTTCAGAGAAACTCAAAGGCGTGCTTTATCATGCTCCACAGAACCCTGCAACATTGCCACCATTCCATAACAACAACAACAATGCTTCTGCTGCTGTCCATAGTCGGCGACGCAGGAAGAATTCAGAAATAAAAAGGAAAGATCCTGCTCTTCCAAAACCCAAAAGAACCGGTGTCTGTGTTGGCTTCATGTTATTATCAACTCTTCCTATGTTATTAGGTCGAGTGTGA 309 0.4304 MAATGSSVIGVIDGKFESGYIVTVTMGSEKLKGVLYHAPQNPATLPPFHNNNNNASAAVHSRRRRKNSEIKRKDPALPKPKRTGVCVGFMLLSTLPMLLGRV 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00073 102 MobiDBLite consensus disorder prediction 44 58 - -
Pumo3g00073 102 PANTHER HIGH MOBILITY GROUP B PROTEIN 9 4 84 - -
Pumo3g00073 102 MobiDBLite consensus disorder prediction 43 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00073 Pumo-Chr3 1057208 1058374 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00073 5 84 ARID Transcription Factor Family AT3G13350 47.561 5.41e-16 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00073 - - gmx:100783284 112.464