Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00041 ATGAGAGGTTCTCGCAGAGGCAATAGCGATGGCGATAGCGATGGCGAGAGGAAAGCGGTGAGCGAGCAGAACCCCGCCACTCGCAGGGTCATACGCTCCCAATTCCTCCAACTCAAGAATCTCATCAATGAGAAAAGAGATGATTTGATGAACACCGACTCCGACAAGTTCGACACCATCTTGGATGAGTTCGACAAGTTACACGTCCAAGTTGAGAAGCCTAGAGAGCAAGTTGCAGATGCAGAGGCACTGTTAGATCTCACACGCACTCTGGCGGGTTCTGTTAGGTCTTTGGCCAACGAGGGTGTCACCCCTTCTCAATTTGTTTCATCTTTGCTCATACGCTACGCCCAACCTCAAGACTCAATTGATTGGCACAAACTTGGCCTTGCGGTCTCCCCAATCTTCCTCTCCGTTCATGGCTCTTCTACCATGCTTGGTCCCATGGACAACCAGTTTAAGCAACGCAAAACCGGAGTGCGCAGAACCCATGATCCTCGCCCAATTGCAACTACCAGACCTCAACAGCTTGATGAGGCTGTTACAGAAGAAAAAACTGATACTGACAAAAACATGGCCACTATGTTTGACATCTTGAGGAGGACAAAGCGTGCCCGGCTTGAAAACTTAATTTTGAACAGAAAGTCTTTTGCTCAGACAGTGGAAAACTTGTTTGCCCTATCATTCCTAGTGAAAGATGGTCGTGCTGAGATCAGTCTGGACGAAAATTGTTTGCACTATGTTTCACCTAAAAATGCTCCAGCTGCCAACTTAGTATCATCAAAAGAAGTTTCTTACACTCATTTTGTATTCAGATACGATTACCAAGATTGGAAGTTGATGAAAGATGTGGTGCCTGATGGGAAAGAATTGATGCCACAACGGATTCAATGTTGCACTGTAGTTGCCTCTCAGGAAGGGATGGCTGGTGACAATTCCCAACCTGCTGCTTTGGCCGTAACACCTATCAGGAAGCTATCACGGAACCGAGGACTGGTCGTGCAGGAGGAACGTGTTGTAGAAGAATCTCCTGAATGTGATGAGGAAAATGCTTCCAGAGCAGGGGCTATTCGTAGGTGCAAGCGTAAACTTCATTAA 1098 0.4709 MRGSRRGNSDGDSDGERKAVSEQNPATRRVIRSQFLQLKNLINEKRDDLMNTDSDKFDTILDEFDKLHVQVEKPREQVADAEALLDLTRTLAGSVRSLANEGVTPSQFVSSLLIRYAQPQDSIDWHKLGLAVSPIFLSVHGSSTMLGPMDNQFKQRKTGVRRTHDPRPIATTRPQQLDEAVTEEKTDTDKNMATMFDILRRTKRARLENLILNRKSFAQTVENLFALSFLVKDGRAEISLDENCLHYVSPKNAPAANLVSSKEVSYTHFVFRYDYQDWKLMKDVVPDGKELMPQRIQCCTVVASQEGMAGDNSQPAALAVTPIRKLSRNRGLVVQEERVVEESPECDEENASRAGAIRRCKRKLH 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00041 365 PANTHER UNCHARACTERIZED 7 349 IPR027786 GO:0005634|GO:0006281|GO:0030915
Pumo3g00041 365 Pfam Nse4 C-terminal 206 287 IPR014854 -
Pumo3g00041 365 MobiDBLite consensus disorder prediction 1 23 - -
Pumo3g00041 365 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00041 Pumo-Chr3 651239 653793 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00041 28 364 Non-SMC Element family AT1G51130 51.714 6.57e-116 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00041 K22825 - gmx:100792117 637.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g00041 3 651239 653793 Pumo3g00041 3 651239 653793 ECH