Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00024 ATGGGATCGTGCCTCTCGGTGACGGGGGCATCGGCTTCCGTAGATGCTTTTGATGAATCATTATCGAATTCGAGTCCCACCTCGGATTATAGCATGGAAATGCGGGTCCACAGAGTTCCTGGCAGATTGTTCTTGAACGGTTCATCCGAGGTTGCTTCCTTGTTCTGCAAGCAAGGTCGCAAAGGGATCAACCAGGATGCCATGCTTCTTTGGGAGAATTTTTGTTCAAAGGACGACACCGTTTTCTGTGGTGTTTTTGATGGACATGGACCTCATGGCCACATGGTTGCAAAGAAAGTCAGGGATTCCTTCCCTTTAAAGCTCATGGCTCAATGGAACAACAACCCCCCAACTAATATTGGTACCCTCAGAGAATCCTTTGTCATGGCTTGTAAGGTTATGGACAGAGAACTCAAACTGCACCATCAAATTGATTGCTCCTGTAGTGGGACCACGGCTGTTACCTTGCTCAAGCAGGGGCAGGACCTTGTTATTGCGAATGTGGGGGACTCGAGAGCCGTATTGGGTACTCAAGATCGCAATGGTTGTCTTATTGGTGTTCAGTTGACTACTGACCTTAAGCCAGATCTTCCAAGGGAAGCAGAGAGGATAAGGATGTGTAAAGGAAGGGTGTTTGGCCTTAAAAATGAACCAGGGGTTGCTCGAGTATGGCTTCCCAACGTTGATTCCCCTGGCCTTGCCATGTCACGGGCTTTTGGAGATTTTTGTCTCAAGGACTTTGGAGTCATCTCTGTTCCTGATTTCTCATATCACCGCCTCACTCACAGGGATCAATTTCTTCTCTTAGCCACAGATGGGGTTTGGGATGTTTTATCAAACCAAGAAGCTGTCGCCATTGTCGCATCTGCTCCACGCTCTTCAGCGGCTCGATTACTCGTTGAGGCAGCTATTCACGCATGGAAAACCAACCTTCCCAATACTAAGCTTGATGATTGCTCTGTAGTTTGCCTCTTCTTTTCTTCAGATTCACCATCACCGCTCACCGCTACTTAG 1014 0.4793 MGSCLSVTGASASVDAFDESLSNSSPTSDYSMEMRVHRVPGRLFLNGSSEVASLFCKQGRKGINQDAMLLWENFCSKDDTVFCGVFDGHGPHGHMVAKKVRDSFPLKLMAQWNNNPPTNIGTLRESFVMACKVMDRELKLHHQIDCSCSGTTAVTLLKQGQDLVIANVGDSRAVLGTQDRNGCLIGVQLTTDLKPDLPREAERIRMCKGRVFGLKNEPGVARVWLPNVDSPGLAMSRAFGDFCLKDFGVISVPDFSYHRLTHRDQFLLLATDGVWDVLSNQEAVAIVASAPRSSAARLLVEAAIHAWKTNLPNTKLDDCSVVCLFFSSDSPSPLTAT 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00024 337 Gene3D - 47 328 IPR036457 -
Pumo3g00024 337 Pfam Protein phosphatase 2C 57 302 IPR001932 -
Pumo3g00024 337 ProSiteProfiles PPM-type phosphatase domain profile. 51 326 IPR001932 -
Pumo3g00024 337 CDD PP2Cc 51 326 IPR001932 -
Pumo3g00024 337 SUPERFAMILY PP2C-like 51 327 IPR036457 -
Pumo3g00024 337 SMART PP2C_4 42 324 IPR001932 -
Pumo3g00024 337 PANTHER PROTEIN PHOSPHATASE 34 324 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00024 Pumo-Chr3 450783 452291 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00024 36 330 PP2C-type Phosphatase Gene Family AT1G16220 56.928 6.39e-137 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00024 - - gmx:100816114 551.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g00024 3 450783 452291 Pumo3g00024 3 450783 452291 ECH