Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00017 ATGGACATGTCAATGTCATCAAGAAACAATGATGTTGGGGGAAAGGAGGAGGTGTGGCAAGTTGTGGAGGATGTGGATGCTTTTCTCCGTAGTGGTGGCCGGGAACATGTTCCAGATTGTGTTCATGTGTTGCCCGAATTGTTGGAGCGTATGGTGGATAGGTACAACAGTGGGAGAAGCAAGTTTGGGGAGGAGCCAGAAGATGACAAGTCCTTCCTAAATGTTGTGGATCGCATCTCCAAGCTTTCGACATGCGATATTGCTTCCTTGGAGTTGGATCAAACTAGCTCTGTCCTAGAAAAAGCAATGTCCCTGTTAGAGAAAGACCTTTGTTCTCTTCTAGAGGACCCCAAATCCAAAAAACCCAAGAAATCATTCTCCTTTGGTTCCCGTTCTGATCTGGGCACTGAGTCCCCTGGGCCACCACCACCACCACCACCACCACCAGAACATGTCGACCAAGACTTCCCTTTTAATTTCTCTACACAAAAGATTTCCATTTTGAACAAGATCACCACTACCATGATCGCAGCCGGTTACCAGATCGAATGTTGCATGGCTTTTGCCAATTTTAGGCGAAGTGCTTTCAAAACTGCCTTGCAAAGATTTGGACATGGGAATATGAAAATGGAAGACATGTACAGAATGCCATGGGAATCACTCGAAGGACAAATTGCAACATGGAACCAAGTGGTTTGGCATTGCACCACCGTGCTTTTCAATGCTGAACGAAGGCTTTATGACTCCATCTTCCCCAATCAACCCTCTATATCTCAAAACTTGTTCTGTGATCTTGCACGACACGTCATCATTCATTTACTCAACTTTGCACAAGGTGCTGTTTTAACCAAATGGTCAGCAGAGAAACTATTCAAATTCCTAGATATGTACGAGACTTTGAGGGAAGACATTGTTGGGGGTTCTTATTTAGAGCCGTACTGTGCAAAGGAGCTAGCGTATGAGACAACCACTACAAAGGACATGATAATAGAGGCTATTGTGGCCATGTTTTGTGATTTGAAAAACTCCATAAAAAACGATAATGAAAGGATTCCTGTCCCCAATGGTGCAGTTCACCCCTTAACTCGTTATGTTATGAACTATCTTAAATATGCATGCGAGTACAAGGATACCTTGGAGCAAGTGTTTGAGCAAGAGCAAGGTCAAGGTGTCAACGTTGAGACTCAGAATAATCACAAATCCTCCATCCATGAGGAATTGGAAGATGTAGGGACGCCCAAAAATTCACCTTTTGCACTTCAATTGATGACCATCATGGACCTTTTGGATGCAAATGTAGAAAGGAAATCAAAGTTGTATAGGGATCCTGCTTTGCGCTATTTTTTTCTAATGAACAATGGGAGATACATAGTACAAAAGGTCAAAGGGTGTGTAGAGCTTCATGAATTGATGGGTGACAATTGGTGTAGGAGGAGGCAATCGGGGTTGAGGTTGTATCATAAGTGTTATCAGAGAGAAACTTGGAGTAAGGTATTGCAGTGCCTTAAGCCGGAGGGTTTGCAGGGGACTAGGAACAAGGTGTCTAAACAACTTGTGAAGGAAAGGTTTAAGAGCTTCAATGCCATGTTTGAAGAGATACACAAAACTCAGTCTACTTGGATGGTGAGTGATGAACAACTCCAGTCCGAACTCAGGGTTTCAATATCGGCTTTGGTGATCCCAGCATACCGCTCATTTGTTGGAAGATTCAAACACCACCTAGAATCAACTAGACATATTGACAAGTATATCAAATATCATCCCGAGGACATTGAGCTTTTAATTGATGATTTGTTTGGTGGTAATGCTACGTCCATGGCCCGAAGGAGGACATGA 1836 0.433 MDMSMSSRNNDVGGKEEVWQVVEDVDAFLRSGGREHVPDCVHVLPELLERMVDRYNSGRSKFGEEPEDDKSFLNVVDRISKLSTCDIASLELDQTSSVLEKAMSLLEKDLCSLLEDPKSKKPKKSFSFGSRSDLGTESPGPPPPPPPPPEHVDQDFPFNFSTQKISILNKITTTMIAAGYQIECCMAFANFRRSAFKTALQRFGHGNMKMEDMYRMPWESLEGQIATWNQVVWHCTTVLFNAERRLYDSIFPNQPSISQNLFCDLARHVIIHLLNFAQGAVLTKWSAEKLFKFLDMYETLREDIVGGSYLEPYCAKELAYETTTTKDMIIEAIVAMFCDLKNSIKNDNERIPVPNGAVHPLTRYVMNYLKYACEYKDTLEQVFEQEQGQGVNVETQNNHKSSIHEELEDVGTPKNSPFALQLMTIMDLLDANVERKSKLYRDPALRYFFLMNNGRYIVQKVKGCVELHELMGDNWCRRRQSGLRLYHKCYQRETWSKVLQCLKPEGLQGTRNKVSKQLVKERFKSFNAMFEEIHKTQSTWMVSDEQLQSELRVSISALVIPAYRSFVGRFKHHLESTRHIDKYIKYHPEDIELLIDDLFGGNATSMARRRT 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00017 611 Pfam Exo70 exocyst complex subunit 228 596 IPR046364 GO:0000145|GO:0005546|GO:0006887
Pumo3g00017 611 PANTHER EXOCYST COMPLEX PROTEIN EXO70 49 600 IPR004140 GO:0000145|GO:0006887
Pumo3g00017 611 MobiDBLite consensus disorder prediction 117 155 - -
Pumo3g00017 611 Gene3D Exocyst complex component Exo70 59 609 - -
Pumo3g00017 611 SUPERFAMILY Cullin repeat-like 63 599 IPR016159 -
Pumo3g00017 611 MobiDBLite consensus disorder prediction 137 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00017 Pumo-Chr3 375659 377494 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00017 20 610 EXO70 exocyst subunit family AT5G13150 48.203 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00017 K07195 - gmx:100784339 1020.38