Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00001 ATGGCAGAGGTTGGTGTGAATGCCTTACCTTTGATCAATTGGCTCTTAGAGCTCCATTTGGCTAGAACACAGGAAAGAAGAGCACTTGCTTTGACATTGAAAGACACCAGAATGGCAGTGAACAAACTTCATCAAATGCTCAATTTTATAGTTGCAATTATTATACTGGTTATTTGGCTTTTGATATTAGAACTTGCCACCACCAAATTTTTTCTCTTTGTGAGTTCGCAGATTGTCGTGGTTGCATTTATATTTGGAAACACCTACAAGACCATATGTGAAACAATTATTTTCTTATTTGTCCCATTTCATGTGGGAGATAGATGTGAAATTGATGGGGTTCAGCAGATGGTTGGGGAGGCAGGGCCCTCAAATGCAATAAATATAGCCGAGAGGTTGGGACTACCATCTGCTGTTGTAGATACTGCTCATAAGTTATATGGTTCTGCTAGTGCTGTGATAGATGAGGTTATAACTGATATGGAAAGGTTAAAACAAGATTACCAAGAGCTATTGGATGAAGCATGTCATTATCTGAGGTGA 543 0.3904 MAEVGVNALPLINWLLELHLARTQERRALALTLKDTRMAVNKLHQMLNFIVAIIILVIWLLILELATTKFFLFVSSQIVVVAFIFGNTYKTICETIIFLFVPFHVGDRCEIDGVQQMVGEAGPSNAINIAERLGLPSAVVDTAHKLYGSASAVIDEVITDMERLKQDYQELLDEACHYLR 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00001 180 Coils Coil 154 174 - -
Pumo3g00001 180 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 11 120 IPR016688 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00001 Pumo-Chr3 1551 4763 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00001 11 120 Mechanosensitive Ion Channel Family AT1G53470 58.929 2.25e-29 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00001 K22048 - gmx:102665658 145.206