Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo34g00003 ATGTGCCAACCCTTTTCCTCTCTCGCATACCTCACGTGCTGTCATGTAGGGATCTTCGCCCTCGCAACAGACTACCCTACCAGGGCCACCACTGTTGCCCTCCTTCATCAAATCTCTCTTATCTCTCTCCTCCGTCTCACCCTCGTTGACATTGGTCTACCCCACCACCCTCTTGAGACGCGAAAACGTCGACGACGAGTTTTGACAGAGGGGGGTCTTGGGACATTCTTACTGATCTATCATAGGAAGAACTTGAAGAGAAGGAATAATGGGTTTGTTCGCCTGAGTCGCCCCTATATTAGGCTGGAAATATTACAGCTTATTCAGAAGCATGTGAAGGAATTTAAAATGAAGGCATTTGGAAGCCAAAGATCTCAGATGGAAGAGAGGTATGAGATGTCTGAGGGTAAGAACCTTTGGGGCTCCTCTAGTCTTGTACTCAATAAAAATAATTTAAAAATTGACATACTGAAAGGAGTACCAGAATATTATTATCGAGGATCAGATCGTGTGGCCAAAGCTTTATTCGATCTTAAAGATAATGGAAAATCATATGTGGGAGGGAATCTCACTTCAAGCAATGACCATCTGAGAAAGTCTGTTATAGCAGAAGGCGGTGTTAGGAGTCTTGTGGCTTTTCTTGATGGTCCACTTCCCCAAGAATCTGCAGTTGGAGCATTGAGGAATCTGGTTGGATCAGTTTCTGAGGAAACTTTGGTTTCTCTTGGTTTGCTTCCCCATTTGGTTCACGTGCTGAAGTCCAGATCATTGGGTGCTCAACAAGCCGCAACATCTATCATTTGCCGCATTTGCAGCTCAATGGAGATGAAGAAAATAGTTGGTGAAGCCGGGTGCATCCCTCTTCTTATAAAGATGCTTGAGGCTAAATCAAATACTGCTAGAGAGGTTGCCGCTCAAGCAATTTCGAGCCTAATGGTTCTTTCCCAGAACTGCAGAGAAGTTAGGAAGGATGATAAAAGTGTGCCAAATCTGGTCCAGTTGCTTGATCCTAGCCCTCAGAACACTGCAAAAAAGTATGCAGTTTCTTGCCTTGGATCACTTTCTCCAAGTAAGAAATGTAAGAAACTGATGATTTCATATGGAGCAATTAGGTATCTGAAGACATTCCAAGAGCTATAA 1140 0.4386 MCQPFSSLAYLTCCHVGIFALATDYPTRATTVALLHQISLISLLRLTLVDIGLPHHPLETRKRRRRVLTEGGLGTFLLIYHRKNLKRRNNGFVRLSRPYIRLEILQLIQKHVKEFKMKAFGSQRSQMEERYEMSEGKNLWGSSSLVLNKNNLKIDILKGVPEYYYRGSDRVAKALFDLKDNGKSYVGGNLTSSNDHLRKSVIAEGGVRSLVAFLDGPLPQESAVGALRNLVGSVSEETLVSLGLLPHLVHVLKSRSLGAQQAATSIICRICSSMEMKKIVGEAGCIPLLIKMLEAKSNTAREVAAQAISSLMVLSQNCREVRKDDKSVPNLVQLLDPSPQNTAKKYAVSCLGSLSPSKKCKKLMISYGAIRYLKTFQEL 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo34g00003 379 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 189 375 - -
Pumo34g00003 379 Gene3D - 278 378 IPR011989 -
Pumo34g00003 379 SUPERFAMILY ARM repeat 189 375 IPR016024 -
Pumo34g00003 379 Gene3D - 178 277 IPR011989 -
Pumo34g00003 379 SMART arm_5 314 356 IPR000225 GO:0005515
Pumo34g00003 379 SMART arm_5 194 232 IPR000225 GO:0005515
Pumo34g00003 379 SMART arm_5 233 272 IPR000225 GO:0005515
Pumo34g00003 379 SMART arm_5 273 313 IPR000225 GO:0005515
Pumo34g00003 379 Pfam Armadillo/beta-catenin-like repeat 275 311 IPR000225 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo34g00003 190 376 U-box Gene Family AT2G28830 29.744 1.30e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo34g00003 - - gmx:100798922 332.028