Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo323g00006 ATGTTTCCCGCGAATCACGAACGCGCCTTTTCCTTTTCCCGCGATTCAGAAACGTGCGAGTTGGAAACACTCCATCTCCACGAGTCAGAAGCTCTAGTAAACCTCGTCGTTGTGCTTCAAGCCTTCAACCCCGACGTCTGGCTTAATGAGTTCATAGTTTTCATAGATAATGTGTGGTATTTTCATGCTGATTCGGTTTACCACGTTCAAGTGCAGAAGCTGATGCGGAATGAGGAAGAGTGTGGCAGAAAGATACAGGAATTGCAGGGCGAGTTGGCTTCTGTCAGAGAGGAGAACCAGAAACTGGAGAGAAAGTCCTATGGTGAGAAGTTGAATGAATGTGAGGCAAGAAAACTATTCCAGCAACTTATTGATGCCCTGGACTACTACCATAACAAAGGGGTTTATCATCGAGATCTCAAGCCAGAAAACTTGCTTCTTGACAGCAAGGGAAATCTCAAAGTGTCTGATTTTGGATTAAGTGCATTGCAAAAGGCTATTTACCATTTAATGACCGGAACTTGA 525 0.4438 MFPANHERAFSFSRDSETCELETLHLHESEALVNLVVVLQAFNPDVWLNEFIVFIDNVWYFHADSVYHVQVQKLMRNEEECGRKIQELQGELASVREENQKLERKSYGEKLNECEARKLFQQLIDALDYYHNKGVYHRDLKPENLLLDSKGNLKVSDFGLSALQKAIYHLMTGT 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo323g00006 174 ProSiteProfiles Protein kinase domain profile. 1 174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo323g00006 174 Gene3D Transferase(Phosphotransferase) domain 1 54 174 - -
Pumo323g00006 174 SUPERFAMILY Protein kinase-like (PK-like) 107 166 IPR011009 -
Pumo323g00006 174 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Pumo323g00006 174 Coils Coil 71 105 - -
Pumo323g00006 174 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 64 165 - -
Pumo323g00006 174 Pfam Protein kinase domain 97 165 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo323g00006 109 173 CBL-interacting serine-threonine protein kinases AT5G57630 73.846 4.25e-27 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pumo323g00006 Pkinase 1.9e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo323g00006 - - pvu:PHAVU_003G1486000 120.938