Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo323g00001 ATGGTGAAGTTATTAGAAACAATAATGGAATTGACAAGACCAAGTTATGCGGTTGTTTATGTCATTCTCCTTTGTGCGTTGGCCCAAGGGGGCTCAGAAGGGAAGGAAGAGGAGATTTCTAGAGATGGTGGAGGAGGAGGAGCTTTCTCATCATCCATTTATGTGCATGGAATTAAGGTAGAAAATGAATTGAAACATTGTAGGAAAGAATTGATAGAGAGGATCAATGATGACAAATATTTTGACTTGCATCCCCAGGAAGGGAGCAGTGACATGAGGACTACAAAAAATAGCAGAGAAACTAAGGCTCTGCCTCTTCATATGAAAAGAAAAAGCTTGGACTGCATAAAAACTGGTACTCCTCATCCTGCTCCTGTTTCAGAAAAGGGTAGCTCTAGATATTTATTGACAAAGCATTCTGGATCAACCTTGGGTGTGGAAAGTGGTCATGGGAGAAATTTGATTGCTGATTCACCACATAGTGCACCAAGTCCTTCTGCTACTGCTGAATCACCAAGTCATGCTCCAACACCAACCAGTTCTCCACCATCACCAACTCCATCATCACCAACTCCATCATCACAAACTCCATCAACACCAACTCCATCATCACAAACTCAATCATCACCAACTTCATCATCACCAACTAAATCATCACCAACTCCAACTGCCAAAGGCGTGGATTTACCACTCCCTCCAGATATGTTTGCGCCATTTCCACCACCAGCACCTCGTGTACCTCGTTCTCCTCCTCAAAATTTTCGACCTATAGTAAATGCTCCTGTTCCTTCACCACCTAACAATGAAAACAAAAAGAAGCAAACAATTATTTTAGCTGCCACTGTATCAGGAATTATAATCTTGATAGGCTTGGCCCTCTGCTGTCGTGAGGCCAGAGGCAACAAAGGTGACAGAGATGACAGTCCTTTGCTCGTATTAACCTCAAGTGATTATCCTGGTGGTTCAAAGAAGGTTGTTCGATTGGGAGATGCTGACAAGGAAGAACCTGACATTGGCAATGGAAAGATCAACCCTTCTAATGTTAGAAATTGGTCCATTAAGGGTGGAAATAACAATGTCTCACTGGTTGAGACAACAGCATCAGAAGGTGTAGGACAAGTATCAGTGCCTCCTAATGGAAAACCTGGCCCTCCACCTCCACCTCCACCTCCACCTCCAGGACCACCACCACCGGCGACTCCGAAGCCGCCACCGCCTCCTGCTCCTCGTGCACCGCCACCTCCAAAAGGTGCTCATCCTCCACCTGCTCCTCCCAAACCAACGGGAGGTAAAAATCAAGGTCCACTACTTTCTAAAGAAGGAACTTCAAGTGAGGGTGATGCTCCAAAACCCAAACTAAAGCCATTTTTCTGGGATAAGGTTAATGCAAAACCTGGCCAATCAATGGTGTGGCATGAGATCAGTGCAGGATCATTCGTGATCAATGAGGAAATGATGGAATCTTTGTTTGGCTGTACTAACCAGAATAAGAATGAACGTAAAAAAGATTCACCGCATGTAGATACTTCAGTGCAGTATATTCAGATTATTGACCCTAAGAAAGCACAGAACTTGTCAATTCTTTTGCGAGCTCTGAATGTGACAACAGAAGAAGTTATTGATGCTCTTCAAGAAGGTAATGAGATTCCTGTGGAGCTGATCCAAACGTTGCTGAAGATGGCACCTACAACAGATGAGGAACTGAAGCTAAGGCTATTCAATGGACAGCTGTCAGAACTAGGCCCCGCAGAGAGGTTTCTCAAAGTGTTGGTTGACATTCCATTCGCTTTCAAACGTCTTGAATCTCTCATGTTCATGTTTATGCTTCAAGAAGATTTCTCAAGCATTAAGGAGTCCTTTGCCACATTAGAGGTTGCATGCAACGAACTCAGAAAAAGCAGGCTATTCCTGAAACTCCTGGAAGCAGTTCTCAAAACCGGCAACCGCATGAACGACGGAACCTACCGCGGAGGCGCACAGGCATTCAGGCTCGACACCCTCCTCAAACTCTCCGACGTAAAAGGAACCGACGGCAAGACAACGCTCCTACACTTCGTCGTCCAGGAGATCATCCGCTCGGAGGGAATCCGAGCGGTGCGCACAGAGAGAGCAGGCAGAAGCATCTCCAGCGTCGGAACCGACAACGATTCCGACGAAGGAACCGAGGAGTCCGAGGAGCACTACCGTGGCCTCGGACTCCAGGTAGTGTCCAGCCTAAGCGCCGAGCTCCATGACGTGAAGAAGGCGGCGCTCATAGACGGAGACGCGCTCACCTCCACGGTGTCGAAGCTCGGCCACTCCATGCTAAAGACTCAGCAGTTCTTGGACACTGACATGAAGAGCCTCGAGGAAGAGAGCGAGTTCCAGCGCTGCATGGAGAGGTTCATGGAGGGCGCGAGGAAGGAGGTGACGTGGCTGGTGGAGGAGGAGAAGAGGATAATGGCGTTGGTCAAGAGCACTGCGGATTACTTTCATGGAAACGCGGGGAAGGACGAAGGGCTGCGTTTGTTCTTGATCGTGCGTGATTTCTTGATCATACTGGACAAGGTTTGCAGAGAGGTGAGGGAATCCACCATGAAGTTAACCAAGACTGCTAGTTCCAGCAACAACACCAAAGAGGGGGCTAGGAGTTCGGTTTCTTCGCCTGACGCGCGTAGTAGCCAGAGCTCGCCACCTCCGCCGTCTGATCTGCATAGAAGGCTGTTTCCGGCAATTGCGGAGAGGAGAATGGATTACTCTAGCTCTGATGATGACGAAGATGAGGACTTTTAA 2772 0.478 MVKLLETIMELTRPSYAVVYVILLCALAQGGSEGKEEEISRDGGGGGAFSSSIYVHGIKVENELKHCRKELIERINDDKYFDLHPQEGSSDMRTTKNSRETKALPLHMKRKSLDCIKTGTPHPAPVSEKGSSRYLLTKHSGSTLGVESGHGRNLIADSPHSAPSPSATAESPSHAPTPTSSPPSPTPSSPTPSSQTPSTPTPSSQTQSSPTSSSPTKSSPTPTAKGVDLPLPPDMFAPFPPPAPRVPRSPPQNFRPIVNAPVPSPPNNENKKKQTIILAATVSGIIILIGLALCCREARGNKGDRDDSPLLVLTSSDYPGGSKKVVRLGDADKEEPDIGNGKINPSNVRNWSIKGGNNNVSLVETTASEGVGQVSVPPNGKPGPPPPPPPPPPGPPPPATPKPPPPPAPRAPPPPKGAHPPPAPPKPTGGKNQGPLLSKEGTSSEGDAPKPKLKPFFWDKVNAKPGQSMVWHEISAGSFVINEEMMESLFGCTNQNKNERKKDSPHVDTSVQYIQIIDPKKAQNLSILLRALNVTTEEVIDALQEGNEIPVELIQTLLKMAPTTDEELKLRLFNGQLSELGPAERFLKVLVDIPFAFKRLESLMFMFMLQEDFSSIKESFATLEVACNELRKSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFRLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGIRAVRTERAGRSISSVGTDNDSDEGTEESEEHYRGLGLQVVSSLSAELHDVKKAALIDGDALTSTVSKLGHSMLKTQQFLDTDMKSLEEESEFQRCMERFMEGARKEVTWLVEEEKRIMALVKSTADYFHGNAGKDEGLRLFLIVRDFLIILDKVCREVRESTMKLTKTASSSNNTKEGARSSVSSPDARSSQSSPPPPSDLHRRLFPAIAERRMDYSSSDDDEDEDF 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo323g00001 923 ProSiteProfiles Formin homology-2 (FH2) domain profile. 443 873 IPR015425 -
Pumo323g00001 923 MobiDBLite consensus disorder prediction 371 451 - -
Pumo323g00001 923 MobiDBLite consensus disorder prediction 860 902 - -
Pumo323g00001 923 SMART it6_source 443 862 IPR015425 -
Pumo323g00001 923 MobiDBLite consensus disorder prediction 133 147 - -
Pumo323g00001 923 Gene3D Formin, FH2 domain 449 880 IPR042201 -
Pumo323g00001 923 PANTHER FORMIN-RELATED 250 916 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Pumo323g00001 923 MobiDBLite consensus disorder prediction 93 116 - -
Pumo323g00001 923 Pfam Formin Homology 2 Domain 447 847 IPR015425 -
Pumo323g00001 923 MobiDBLite consensus disorder prediction 83 270 - -
Pumo323g00001 923 MobiDBLite consensus disorder prediction 301 352 - -
Pumo323g00001 923 MobiDBLite consensus disorder prediction 707 726 - -
Pumo323g00001 923 MobiDBLite consensus disorder prediction 198 223 - -
Pumo323g00001 923 MobiDBLite consensus disorder prediction 176 197 - -
Pumo323g00001 923 SUPERFAMILY Formin homology 2 domain (FH2 domain) 512 863 - -
Pumo323g00001 923 MobiDBLite consensus disorder prediction 378 429 - -
Pumo323g00001 923 MobiDBLite consensus disorder prediction 233 263 - -
Pumo323g00001 923 MobiDBLite consensus disorder prediction 159 175 - -
Pumo323g00001 923 MobiDBLite consensus disorder prediction 860 894 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo323g00001 417 855 FH2 protein (formin) Gene Family AT3G05470 48.206 1.13e-118 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo323g00001 - - gmx:100780844 824.698