Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo313g00001 ATGGCTGCTCCAAAAGTGAACAAAAAGTTGCTTGAAGACCTTGTTGAAGTAATGGGATTTCCAAAGGCACGGACAACCAGAGCACTTCATTATTCTGAGTTTCTAGCCACTGAACCGGAGAGGATTGAAGCAGGTAAGAGACTCCTTGAGGCAAAGCGAATTGCAGAAGAAAATGAAAGAAAATGGTATCTTAATGAGATTAGTTATAGCATGTTTGTTTTTGCGTTCAAAGCTCCTCAAACCAACGTTCAACCAAAAGCAAGCAATGCTTGCTTCTCACAAAATGTAGCCTTGGAACGCGTGCCAGCTGCCTTCAACGTGTACACAAACACGCTCTTAATATTAAATAGAAGGTATAAACAAGGATTGCCTTTAGAAGGCCAAGCAACTGTGAGATCATCTGCTATTGAAACACAACAAGAAAAGAAGTCAAAGCCTGTTTATACAACTGCAAAAGTTGAAAAGTTAAGAGAATGTCTGAGGAATCTCAAGCGTAATCATCAGGATGCCAGAGTCAGAAGGGCCTTTCAAACACTTTTAGTCTATGTTGGAAATGTTGCCAAGAATCCCAAGGAGGAAAAGTACAGGAAAATTCGACTGAAAAACCCATTATTCCAGGATAGAGTTGGAAGTTTAAATGGAGGAGTAGAGTTTCTTGAGCTATGTGGTTTTGAGAGAACGGGTGACTTCTTGTATCTTCCTGATGAAAAGGTTGACATGGCGCTGCTAAATTCAGCTGGTTTTGCCCTAAATTCTGCAATGACAAACCCTTTCTTTGGAGTTTTAAGTTCTACTCACAATTAA 804 0.4005 MAAPKVNKKLLEDLVEVMGFPKARTTRALHYSEFLATEPERIEAGKRLLEAKRIAEENERKWYLNEISYSMFVFAFKAPQTNVQPKASNACFSQNVALERVPAAFNVYTNTLLILNRRYKQGLPLEGQATVRSSAIETQQEKKSKPVYTTAKVEKLRECLRNLKRNHQDARVRRAFQTLLVYVGNVAKNPKEEKYRKIRLKNPLFQDRVGSLNGGVEFLELCGFERTGDFLYLPDEKVDMALLNSAGFALNSAMTNPFFGVLSSTHN 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo313g00001 267 SUPERFAMILY PUG domain-like 154 258 IPR036339 -
Pumo313g00001 267 Coils Coil 153 173 - -
Pumo313g00001 267 SMART PGNneu 174 235 - -
Pumo313g00001 267 PANTHER F13M7.16 PROTEIN 1 33 - -
Pumo313g00001 267 CDD PUB_UBA_plant 160 262 - -
Pumo313g00001 267 Pfam PUB domain 171 239 IPR018997 -
Pumo313g00001 267 Gene3D - 139 252 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo313g00001 1 32 C2H2 Transcription Factor Family AT1G04850 65.625 3.68e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo313g00001 K24348 - gmx:100781260 302.753