Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02692 ATGATGCGGGTGACGATGGTTTGGAACTTGGGAAGTTTGATGGGGGAGAAGGCTCCATGGGAGGGTCACAGGTGCGGAATGATAGCAAGGGGTTGCCCATACGTTTTGGTCAGGGGAAGGAAACTGCCACCATCTTCAATTCAATTTGTCACCATTTCCCAGTCTCATCAGTTCAATATATATATATATATAATGTCTTCTTCTTCTTCTTCTAGTAGATGGACAGTTCAGGAAAACAAAGCGTTTGAAAGAGCTATAGCTGTCTATGACAAGGACACTCCTAACCGTTGGTGCAATATTGCAAGGGCTGTTGGTGGAAAAACTCCAGAGGAAGTGAAGAGGCACTATGATCTCCTTGTGGAGGACATTAGGCGTATTGAGTCAGGTCAAGTGCCCTTTCCAATCTACAGGAACCTCAAAGATGGGGCATGA 432 0.4537 MMRVTMVWNLGSLMGEKAPWEGHRCGMIARGCPYVLVRGRKLPPSSIQFVTISQSHQFNIYIYIMSSSSSSSRWTVQENKAFERAIAVYDKDTPNRWCNIARAVGGKTPEEVKRHYDLLVEDIRRIESGQVPFPIYRNLKDGA 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02692 143 SUPERFAMILY Homeodomain-like 66 123 IPR009057 -
Pumo2g02692 143 CDD SANT 73 116 IPR001005 -
Pumo2g02692 143 SMART sant 70 122 IPR001005 -
Pumo2g02692 143 Gene3D - 64 133 - -
Pumo2g02692 143 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 66 138 IPR044636 GO:0003700
Pumo2g02692 143 FunFam Transcription factor SRM1 66 133 - -
Pumo2g02692 143 ProSiteProfiles Myb-like domain profile. 66 120 IPR001005 -
Pumo2g02692 143 Pfam Myb-like DNA-binding domain 72 116 IPR001005 -
Pumo2g02692 143 ProSiteProfiles SANT domain profile. 69 124 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02692 Pumo-Chr2 58691639 58695654 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pumo2g02692 Myb_DNA-binding 4.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02692 - - gmx:100784910 154.451