Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02687 ATGATGGTTTCAATCTCCAAGATTACGTTAGTAGTCTGTGTGTTGTTAACTATACTTCTTGTTATCCAGTTGAAGGGCTGTGAGAGCGGAGTTTTACCATTCAAAGTAAAAGAAGGACTTTTGCCTTCCAAAGTAAACATTGAAATAAGCAACTTCTTAACTATGAAGTACTTGGGTCTTCATTGCAAAGACAAGCATCATGATCTTGGCTCTCTATTTCTGAATGTTGGCGAAACATATAATTTTAGTGTTAGGCCTAATTTCTTTGCAGATGTAACCTTGTACTTTTGTCGCTTTATATGGTTTGAAGAAATACATTATTTTGACATTTATGTACAAGACAGAGATGGATCTTGTGTTGACAATCGGTGTTGTTGGGAGATATTTGAGTCCGGACCCTGTAAGATTAATCCGAGGTCTCGTGAATGCTTTTTGTGGAATATAGTATCTATAGGAAGGAGGTAG 465 0.3656 MMVSISKITLVVCVLLTILLVIQLKGCESGVLPFKVKEGLLPSKVNIEISNFLTMKYLGLHCKDKHHDLGSLFLNVGETYNFSVRPNFFADVTLYFCRFIWFEEIHYFDIYVQDRDGSCVDNRCCWEIFESGPCKINPRSRECFLWNIVSIGRR 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02687 154 PANTHER - 42 137 IPR010264 -
Pumo2g02687 154 Pfam Plant self-incompatibility protein S1 47 139 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02687 Pumo-Chr2 58645291 58645755 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02687 48 151 Carbohydrate Esterase AT3G16970 40.909 3.02e-21 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02687 - - pvu:PHAVU_004G004500g 159.458