Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02682 ATGGAATGGAGCTGGCTTATTGACATTGGAGGATTTGCGAAGAAAGTGAAAAATACTACTCTGTCAACAGCTGATCAAATCAAGGACTGTGGAACATATCGTGAATGCCCGAAATGTCATTATCATATTAATAACAATGATGTTTCTCATGAGTGGCCTGGCTTTCCTGTTGGTGTAAAGTTTGATCCTTCTGATGTTGAGCTTTTAGAGCATTTAGCAGCAAAGTGTTGTATTGGAAACAGAAAGCCCGACATGTTTATTCATGAGTTCATCCCAACTCTAGAAGGAGAGCAAGGTATTTGCTACACTCATCCACAAAATCTTCCAGGTACTAAGACAGATGGGAATAGTGTCCATTTCTTTCACAAAACAGTTAATGCATATGCTACTGGACGAAGGAAGCGTCGAAAGATTCATCATCAAGATGGTTTGACTGAGGAGCATGTACGCTGGCACAAGACTGGTAGGACCAAAGCTGTGATAGAAGATGGAGTGCATAAGGGTTTTAAGAAGATCATGGTTCTTTATATAAGATCTAAGAAAGGGTCCAAGCCATATAAAACTAATTGGGTGATGCATCAGTACCATCTAGGGAGTGAAGAAGATGAGAAGGATGGTGAATATGTGGTTTCAAAAATATTTTATCAACGGCAGAAGCACAGTGAGAAGAATGAGGAGAATACAGTGGTTGAAGATTCTAACATAGCAGCACAAGCAGGTCCAAGAACCCCAAAACCAAATCCCCCTACTCGACCTTGTACGGGCAAATGTAATGACAACTTTGATGAAAATGAACTTCTGTCATTCATCCAGGATGTCAAGCCTGTACCTGGAGAATCACATGCACCACCATCTGATGTTCAGGATGAGGACAATAAGGATGACCCTGCATGGTTGGCTGGTGAATCACAGGCTGACTGTGACTTTTATGGCTTGGAAGACATATTGTTATGCAAGGAGATGTTAGATTCATCTTCTCTCTTAAATCATTCTGGATTGGCCTCCACTTCTAATGGCAATGCAAACAAGTTGGTTGCACCTGGAAACAATAACGATTATGCATCTTATGGAGTTTCTGACCTGGACACCCTGGTGGAATTGGATACTCCTCCAGATTTTGATCTTTCTAATTTACAATTTGGTTCTCAAGACATAAGGTGTTGCTTTGAAGCAACTTCTAGTTGGGACTGA 1191 0.4097 MEWSWLIDIGGFAKKVKNTTLSTADQIKDCGTYRECPKCHYHINNNDVSHEWPGFPVGVKFDPSDVELLEHLAAKCCIGNRKPDMFIHEFIPTLEGEQGICYTHPQNLPGTKTDGNSVHFFHKTVNAYATGRRKRRKIHHQDGLTEEHVRWHKTGRTKAVIEDGVHKGFKKIMVLYIRSKKGSKPYKTNWVMHQYHLGSEEDEKDGEYVVSKIFYQRQKHSEKNEENTVVEDSNIAAQAGPRTPKPNPPTRPCTGKCNDNFDENELLSFIQDVKPVPGESHAPPSDVQDEDNKDDPAWLAGESQADCDFYGLEDILLCKEMLDSSSLLNHSGLASTSNGNANKLVAPGNNNDYASYGVSDLDTLVELDTPPDFDLSNLQFGSQDIRCCFEATSSWD 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02682 396 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 4 300 IPR044799 GO:0003700
Pumo2g02682 396 MobiDBLite consensus disorder prediction 220 257 - -
Pumo2g02682 396 Gene3D NAC domain 64 222 IPR036093 GO:0003677|GO:0006355
Pumo2g02682 396 MobiDBLite consensus disorder prediction 274 299 - -
Pumo2g02682 396 Pfam No apical meristem (NAM) protein 56 197 IPR003441 GO:0003677|GO:0006355
Pumo2g02682 396 SUPERFAMILY NAC domain 40 216 IPR036093 GO:0003677|GO:0006355
Pumo2g02682 396 FunFam NAC domain-containing protein 8 64 220 - -
Pumo2g02682 396 ProSiteProfiles NAC domain profile. 55 216 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02682 Pumo-Chr2 58595282 58599034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02682 14 218 NAC Transcription Factor Family AT1G28470 50.222 4.13e-64 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pumo2g02682 NAM 7.4e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02682 - - gmx:100780662 721.465