Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02672 ATGGAAAAAAAGGTTGTGGAAAACCTTTGGAACGGTGATAGAGAATCTCAAATTCAAGCAGCTTTGGAACTTGGTAGATTAAGCAGTAAGCAGAGGCACAAGTTGGAAGAAAGTGGAGTTATGGTTCCTCTTGTTTCCATGCTTCATTCTGAAGACTACGAAGCCATAGAAGCTGCTTTGTGTGCTTTGCTCAGCCTTTCCTTTGGCAGTGAAAGAAACAAGATTCGGATCGTCAAATCTGGAGCTTTGCCGGTTCTGCTGAGTCTCCTCCATTGTCATAGCCAGACAGTGACACAATTGACTTTAGCAGCCATGCTAACCCTCTCTTCTTGCAAGGCAAATAAGGTAGCAATTGCTTCATCTGGGGCTGTCCAACTCTTAGCTGAATTTGTCAACGGCCATTGTAGCACTCAGTCTCAGCTTGATGCCATAGCTACTGTACACAACCTCACAACCTGCCAAGAGATTATTCCGTTGATTGTCTCTTCTGGGGTTACGCTCTCCTTGCTTGAACTGATCCACAGCACAGTAAAATCATCTCCATTGGTTGAGAAAGCAATTGGGTTGCTACAGAACATTGTGTCTTCATCAGAGAGTGCACTTTGTGAGGCTGCTAGTACTGGTGGAGCAATCAGGATACTAGTTGAGACTATTGAAGATGGATCTTTACTAAGCAAAGAGCATGCAGTGTGTATACTTCTCCTTATATGCCAGAGCTGCAGAGAGAAATATAGAGGGTTGATTTTGACAGAGGGAGTGATGCCAGGATTGCTTCAGTTAAGTGTGGATGGAACATGGAGAGCCAAATCCATGGCGCGAGAATTGTTGTTCCTTCTGAGGGACTGCACCAATTATAGCTCAAGAAGTAAACAAATCAATCATGAACTTTTAGAACGGATAATGGAAGAAATTGAAGCCGAAGGAGAGAAATTGGCAGATACTACTTTAAGGTTGGTAGAGGAGATGATTGCAAAGCTCCATGCTTAA 987 0.4347 MEKKVVENLWNGDRESQIQAALELGRLSSKQRHKLEESGVMVPLVSMLHSEDYEAIEAALCALLSLSFGSERNKIRIVKSGALPVLLSLLHCHSQTVTQLTLAAMLTLSSCKANKVAIASSGAVQLLAEFVNGHCSTQSQLDAIATVHNLTTCQEIIPLIVSSGVTLSLLELIHSTVKSSPLVEKAIGLLQNIVSSSESALCEAASTGGAIRILVETIEDGSLLSKEHAVCILLLICQSCREKYRGLILTEGVMPGLLQLSVDGTWRAKSMARELLFLLRDCTNYSSRSKQINHELLERIMEEIEAEGEKLADTTLRLVEEMIAKLHA 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02672 328 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 39 81 IPR000225 GO:0005515
Pumo2g02672 328 FunFam U-box domain-containing protein 4 201 317 - -
Pumo2g02672 328 Coils Coil 294 314 - -
Pumo2g02672 328 SUPERFAMILY ARM repeat 4 310 IPR016024 -
Pumo2g02672 328 SMART arm_5 111 152 IPR000225 GO:0005515
Pumo2g02672 328 SMART arm_5 70 110 IPR000225 GO:0005515
Pumo2g02672 328 SMART arm_5 153 195 IPR000225 GO:0005515
Pumo2g02672 328 SMART arm_5 28 68 IPR000225 GO:0005515
Pumo2g02672 328 Gene3D - 3 277 IPR011989 -
Pumo2g02672 328 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 81 123 IPR000225 GO:0005515
Pumo2g02672 328 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 164 208 IPR000225 GO:0005515
Pumo2g02672 328 PANTHER U BOX DOMAIN-CONTAINING 3 282 - -
Pumo2g02672 328 FunFam U-box domain-containing protein 4 3 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02672 Pumo-Chr2 58323280 58324801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02672 3 281 U-box Gene Family AT2G23140 33.333 2.79e-30 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02672 - - gmx:100778534 555.058