Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02670 ATGGAGTCTCCTGTTAATGGAGTTGATTCCTTATCAGAGGTTCAGAATTCTGTTTCTGGGGTACATCATGATCCTCTTTCATCTGGGACTCCCTGTCCTTCGCGACCTCCCTTGAGAGCATCTAGAAACCACGGGGCTAGTCATCAAACCAAGACCATCCACCATCAAAACAGCCATGTAATTAATCAAAAACATTCTTATCAAGAGGGCAACAATGTGGAGCATGAAGGGTTTCCAACAAAATTGTGCAGCAAGCAACCACTCGATGATTCCAAGAATTGTGAGTCAAATGGTGTGTTAGAATCTGAGAATTGCATCTTAGGACCGTCCAAACGAACCGTTGCTAATCATGCAAAGAGTTACTGTCAGTCAGAGGTTACTTTCTGTCCAAGTCCTCAGAATAGTTTCTATTCAGCCACTGTCTACTCAGAAGCCAAAGAAAGTTTCACTAACACTGAGGTCAGTGAGTGTGCTAGTGTTGACAAGTCTCGTGAAAGTGGAGAAATGGCAAATTCCTGTGATTTTAATGAGAGCAGGAAGACCAGCATCTGTAGAGCAAGTACTGGCAGTGATGCTAGTGATGAGAGCAGCACCAGTAGTTTGAGCAGTGTCATGTATAAACCACACAAGGCAAATGACATAAGATGGGAAGCGATTCAAGCCGTCCGAGCCCGAGATGGGATGTTGGAAATGAGGCATTTCAGGTTGTTGAAGAAATTGGGGTGTGGAGACATAGGAAGTGTGTATCTAGCAGAACTGAGTGGCACTAGAACTTCTTTTGCCATGAAAATCATGAACAAGACCGAGCTGGCGAACCGCAAGAAGCTACTGAGGGCACAGACAGAGAGAGAGATATTGCAGTCTTTAGATCATCCTTTTCTACCCACATTGTATACACACTTTGAGACAGAGACATTCTCTTGCTTGGTAATGGAGTTCTGCCCTGGTGGGGACCTGCATGCACTCAGGCAAAGACAACCAGGGAAGTATTTTTCAGAGCATGCTGTCAGGTTTTATGTGGCAGAAGTTCTCCTTGCTTTGGAGTACTTGCATATGCTTGGGATCATCTACAGAGACCTTAAACCTGAGAATGTGTTGGTGAGAGAAGATGGTCACATAATGCTTTCAGATTTTGATCTCTCTCTAAGGTGCACTGTCAGTCCAACCCTAGTAAAGTCATCAAACAACACCTTGGAGACAAAAAGCTCAGGATACTGCATTCAGCCTGCTTGTATTGAGCCAACATGTGTCATGCAGCCAGACTGCATCCAACCGGCATGCTTCACACCGCGCTTTCTATCCGGCAAATCCAAGAAAGACAAAAAGTATAAACCAAAGAATGACATGCATCATCAGGTGACCCCTCTTCCTGAGCTAATTGCTGAGCCAACAAATGCCAGATCAATGTCCTTTGTTGGAACACATGAGTACTTGGCGCCGGAGATCATCAAGGGTGAAGGGCATGGAAGTGCTGTGGACTGGTGGACATTTGGGATATTCTTGTATGAGCTTTTGTTTGGCAGAACGCCATTCAAAGGTTCAGCGAATCGTGCAACACTGTTTAATGTAATTGGGCAGCCTCTAAGGTTTCCAGAATCTCCTACTGTCAGCTTTGCTGCCAGGGACTTGATCAGAGGCTTACTTGTGAAAGAGCCTCAGCATCGTCTTGCCTATAGACGTGGCGCGACAGAGATAAAACAACATCCATTCTTTCAGAATGTTAACTGGGCACTGATCCGTTGTGCAAATCCTCCAGAGGTGCCTAGGCAGGTTATGAAGCTTGCTCAAACGGAAAAGGAGCTTGGTGTGAAGCCTTCTGGTAATTATTTAGATATTGATTTCTTTTGA 1848 0.4497 MESPVNGVDSLSEVQNSVSGVHHDPLSSGTPCPSRPPLRASRNHGASHQTKTIHHQNSHVINQKHSYQEGNNVEHEGFPTKLCSKQPLDDSKNCESNGVLESENCILGPSKRTVANHAKSYCQSEVTFCPSPQNSFYSATVYSEAKESFTNTEVSECASVDKSRESGEMANSCDFNESRKTSICRASTGSDASDESSTSSLSSVMYKPHKANDIRWEAIQAVRARDGMLEMRHFRLLKKLGCGDIGSVYLAELSGTRTSFAMKIMNKTELANRKKLLRAQTEREILQSLDHPFLPTLYTHFETETFSCLVMEFCPGGDLHALRQRQPGKYFSEHAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCTVSPTLVKSSNNTLETKSSGYCIQPACIEPTCVMQPDCIQPACFTPRFLSGKSKKDKKYKPKNDMHHQVTPLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSANRATLFNVIGQPLRFPESPTVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQNVNWALIRCANPPEVPRQVMKLAQTEKELGVKPSGNYLDIDFF 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02670 615 SMART serkin_6 234 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g02670 615 SUPERFAMILY Protein kinase-like (PK-like) 209 592 IPR011009 -
Pumo2g02670 615 Gene3D Transferase(Phosphotransferase) domain 1 318 387 - -
Pumo2g02670 615 PANTHER FLIPPASE KINASE 1-RELATED 72 594 - -
Pumo2g02670 615 ProSitePatterns Serine/Threonine protein kinases active-site signature. 355 367 IPR008271 GO:0004672|GO:0006468
Pumo2g02670 615 FunFam serine/threonine-protein kinase D6PK-like 318 385 - -
Pumo2g02670 615 Pfam Protein kinase domain 468 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g02670 615 Pfam Protein kinase domain 235 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g02670 615 Gene3D Transferase(Phosphotransferase) domain 1 465 589 - -
Pumo2g02670 615 Gene3D Phosphorylase Kinase; domain 1 232 317 - -
Pumo2g02670 615 FunFam serine/threonine-protein kinase D6PK-like 466 589 - -
Pumo2g02670 615 ProSiteProfiles Protein kinase domain profile. 234 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g02670 615 FunFam Serine/threonine-protein kinase D6PK-like 232 317 - -
Pumo2g02670 615 CDD STKc_phototropin_like 232 589 - -
Pumo2g02670 615 MobiDBLite consensus disorder prediction 17 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02670 Pumo-Chr2 58312890 58316948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02670 142 615 AGC Kinase Gene Family AT5G47750 71.138 0.0 706
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pumo2g02670 Pkinase 5e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02670 K08286 - gmx:100810909 1151.35