Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02627 ATGCAAGGGGTAACTCCCTTGCAAGACACTCCAAAGGTTAGCGTCGAGGATGACTTCTTATCACATACTGCAAAAAGTACCATTTTAGGCTTGAAGGATTGTAATGAAAAGTCAACCTTTGTTGTGCTAGCTACTATCAAGCATATTGATACGCTGGCAAAATGGTGGTACATGGCATGTCATTGCAACAAGAAAGTCAAGGTAGATGAAGGGCTGTATTACTATTCTAAATGTGAACGCCATGTTTTCAAAGTAACCCCAAAATATTCGATCAGAATCCAAGTTAGTGATGACACAGACTCAACCACCTTTGTTGTTTTTGATCGTGATGCAACTCACCTACTTGACAAATCGTGTTCGGATATGGTTGAATCCTTTACTACGGACCTCATGAAAAAATTTAATGATAAAAATGTCGTGGCTGGATCGGATTGTGAGATTGTTGAATGTACTCATGAGTCGATACATAAGGAAAGCACCACCACACAGAAAAGGAAATCTCCTATGGATGAATCTGATTTATCTGTTTCTGCCACAGGCAGAGTTTTAACAAAAGTCAAGATTGAGAAGGAATAA 576 0.3906 MQGVTPLQDTPKVSVEDDFLSHTAKSTILGLKDCNEKSTFVVLATIKHIDTLAKWWYMACHCNKKVKVDEGLYYYSKCERHVFKVTPKYSIRIQVSDDTDSTTFVVFDRDATHLLDKSCSDMVESFTTDLMKKFNDKNVVAGSDCEIVECTHESIHKESTTTQKRKSPMDESDLSVSATGRVLTKVKIEKE 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02627 191 CDD RPA1_DBD_C 40 129 IPR047192 -
Pumo2g02627 191 MobiDBLite consensus disorder prediction 158 177 - -
Pumo2g02627 191 Gene3D - 20 165 IPR012340 -
Pumo2g02627 191 Pfam Replication factor-A C terminal domain 40 129 IPR013955 -
Pumo2g02627 191 SUPERFAMILY Nucleic acid-binding proteins 35 128 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02627 Pumo-Chr2 57530807 57531929 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02627 19 122 Core DNA Replication Machinery Family AT5G08020 30.841 7.46e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02627 - - tpra:123915062 147.902