Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02615 ATGGCAAACATTTCTAGCATTCCATCACACATAAAAGCTTGGGTCTATTCTGAATATGGGAACATAGAAGAGACTCTCAAATTTGAATCTAACATACATATACCAGACATCAAGGAAGACCAGGTGCTCATCAAGGTTGTGGCTGCAGCTCTTAATCCTGTAGATTATAAGAGGGCCCTGGGGTATTTCAAGAACACTGACTCTCCCTTACCTAGTGTTCCGGGGTACGATGTTGCTGGTGTGGTGGTAAGAGTGGGAAGCGAAGTGAGGAAATTCAAGGTTGGGGATGAGGTTTATGGTGATATCAATGAGTATGCTGTGAATAATCCAAAGACCATTGGGACTTTGGCAGAGTATACTGCTACTGAAGAGAAAGTGTTGGCTCACAAACCCTCCAATTTGAGCTTTATTGAAGCTGCTAGCCTTCCTTTAGCTATCATCACTGCTTATCAAGGACTTGAAAGAGTGGAATTTTCTGCTGGCAAATCTATACTTGTTCTAGGAGGTGCTGGTGGAGTTGGATCCCTTGTTATTCAGCTCGCCAAGCACGTTTTTGGCGCATCTAAGGTTGCAGCTACTGCTAGTACTCCAAAACTGGATTTGTTAAGGAACTTGGGAGCAGACTTGGCTATTGATTATACAAAGGAGAATTTTGAAGAACTGCCAGAAAAGTTTGATGTAGTGTACGATACAGTAGTAGGGCTGAGTGACAAGGCATTGAAGGCCATTAAAAGGGGGGGCAAAGTTGTGGCACTAGATCCACCTGCAACTCCACCGGCTATCTTGTTCGAGGTCATTTCAGATGGCGCTGTGTTGGAGAAATTACAACCTCACTTAGAAAGTGGGAAGGTGAAGGCAGTATTGGATCCTAAGAGTCCCTTTCCATTTTCTCAGACTGTGGAAGCATTTGCATACTTGAAGACTAATAGAGCCATTGGCAAACTAGTCATACATCCCATCCCATAA 966 0.4369 MANISSIPSHIKAWVYSEYGNIEETLKFESNIHIPDIKEDQVLIKVVAAALNPVDYKRALGYFKNTDSPLPSVPGYDVAGVVVRVGSEVRKFKVGDEVYGDINEYAVNNPKTIGTLAEYTATEEKVLAHKPSNLSFIEAASLPLAIITAYQGLERVEFSAGKSILVLGGAGGVGSLVIQLAKHVFGASKVAATASTPKLDLLRNLGADLAIDYTKENFEELPEKFDVVYDTVVGLSDKALKAIKRGGKVVALDPPATPPAILFEVISDGAVLEKLQPHLESGKVKAVLDPKSPFPFSQTVEAFAYLKTNRAIGKLVIHPIP 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02615 321 SMART PKS_ER_names_mod 20 317 IPR020843 GO:0016491
Pumo2g02615 321 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 3 321 IPR044626 GO:0016628
Pumo2g02615 321 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 134 261 IPR036291 -
Pumo2g02615 321 SUPERFAMILY GroES-like 8 166 IPR011032 -
Pumo2g02615 321 Pfam Alcohol dehydrogenase GroES-like domain 40 101 IPR013154 -
Pumo2g02615 321 Pfam Zinc-binding dehydrogenase 205 317 - -
Pumo2g02615 321 CDD MDR_like_2 12 317 - -
Pumo2g02615 321 Gene3D - 18 317 - -
Pumo2g02615 321 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 161 182 IPR002364 GO:0008270|GO:0016491
Pumo2g02615 321 Gene3D - 153 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02615 Pumo-Chr2 57250678 57264640 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02615 40 258 Monolignol Biosynthesis Gene Families AT3G19450 25.197 7.40e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02615 K18980 - gmx:100791274 535.028