Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02604 ATGTTAAAGTCTGAGATTGCTAAAATAACTGATAAAGGTGGGCTTGTGGACTTTGAAGGAGTTGAAAGACTGGTACAGCTTATGCAACCTGATAGTGGTGATAAAAAAATAGATTTGGCAGGGCGGATAATGCTTGTCGATGTAATTGCACTTACGGACCGGTATGAATGTCTAGGCAGGTTTGTACAACTCAGGGGTTTGCCTGTGTTGGATGAATGGCTGCAGGAGGTCCACAAGGGCAAAATTGGTGATGCAAATATGCCTAAAGAAAGTGATAAGTCTGTTGAAGATTTTTTGTTAGCTTTACTTCGTGCGTTGGATAAGCTTCCTGTGAACCTTCATGCACTGCAAACCTGTAATGTTGGAAAGTCTGTTAATCATTTACGCACCCACAAAAATTCTGAAATTCAGAGGAAAGCTAGGAGTTTAGTGGACACATGGAAGAGACGCGTGGAAGCTGAAATGAATATGACTGATTCGAAGTCTGGTTCAAACCGTGCCGTTTCTTGGCAAGCAAAGCCAGCAAATGCTGAGTCTCCTCATGTTGGAAATAGGAAAACAGGAGGATCCTCTGATAATGTTGCGAAGAGCTCTTCAATTCAACCCTCAATATCTAAAAATTCCCAATCTAAGTTAAGTTCTGGAGAAGCATTGTCCAAGTCCTCTTCATCTCCTGGCTCAACTAAATCAATGACTACCTCAGCGGGCAGTAACTCAAAAGATCAAAACAGTAAAGTCTTGGTTGGAGCCGCAACATCAGATCTACCGCTGACACCTATCAAGGAGGAGAGGAGCAGCAGTTCTAGTCAATCTCAAAATAACAGTATATCTTGTTCTAGTGAAAATGCTAAAACTATTGGTTCTTGCAGGGAAGATGCGAAGAGCTCGACTGCAGTGTCAACGAGTGTGGGCAAAATTCCTGGTGGTGGGTCTCGAACTCGCAAGTCAAGCAATGGTCTACATGGGGCTGGTGTTGCAGTAGGCCCGAAGGAGCACAGCTCTGCAAAAAATTCAACTAGAAATTCACCTTCTGAAAAAGTTTCACCAACTCGAGTCTCCCATGAAAAATCCGCTGACCAGCCCGTTACTGATCAAGGGAATAATCAGCGATTGATTCTCAGGTTGCCAAACACTGGTCGCAGTCCTTCAAGGGGAGCCAGCGGTGGCTCTTTTGAAGATCCAGCTATCATGTGCTGCAAAGCTTCATCTGCTGACAGGAATGAGAATCAGGACAGAAGAGTGAAAACCAAAACTGAGTGTTTGCTGACCCATTTGTCAAATATGATGAATGAGGCATGTGATGCTAGTGATGGTTTGCTTGGTGTTGAAGAAGGTAAGTGCCATCCAATGGTTGATGAGCGATGCAGGGCAAATGAAGATGGTGATAAGGTGGCAGAAACATCAAAACCAACTAGTTTGTCATCTGGATTTTTTTCCAGATCAGGGCAGACTTATGATACTTCTTTAAGCCCCATGAATGCATTAGTTGAAAGCTGTGTGAAAATTTCTGAAGCAAGTGCATCTGTGTCCCATGGAGATGATGGGATGAACCTACTAGCTACTGTGGCTGCAGGGGAAATATCAAGATCTGAAAATGCTTCACCTTTGGCATCCCCCGAGAGAAAGTTTCCTGCTGCAGATGAATTGAGCTCAGGCAATGATTTCAAGTTAAAACATTCTGGTGAAGCAGCTGTTCGCACTCTTTCACAGTTGGATGGTGGGGCTACTGCAGAGCAGCCTTTGAATACAGTTGATCCATTGCAGGTAAAAAATGATTCAAGGCATCCTGCTACGACAATATCACATGATTTTTCAGGAGATGGTGAAACCATTTCATCCAATTGTGTAGAGAAAAGTGGTGATGGTAGAACTCAGATAAATAGCTCCCCTACAGATTTGTTACAAAATGCTGAAGGTCCATGCTTACGGCCTGAAACCAAAGAGGATACTTCTGAAACTATGTTGTCAGCTAAAAAGGAGACTAATGCAGACCCTGGAGGTTCAGACTCTAAATTAAAGTCAATGACTTCCTCTTTTGATGATGATCAGATGGTTGATCACATGATGGAGGAAACCATTGAGAATGAGAAAATGGTGGTTTCAAAAGCTGTTGCAAGTGTTAAGTCTGAAAATGAATCAGATGAAAAACAACCTGAGTTATCCTCAGGTGTGGATAATGAGAACCAGGTTAGTGCAGAGAAAGCAACTGGTACTGGTATACTAGTGCAAAAGGCCTCTCCAGTTGCAGAAAACTGTGAGTCTATATATTTAAAAAAGGAGTCACCTACTTCTGGTAATGCTGTAATGATATCCAGGGATGAAAATGCTGATGACATGAAGTCAGTTGTGGTTGAGCTTGATGAAAGACGAATGGAGCAGGATTTATCAGTTGCAGATGATGTTAACGAATGTGCTGAAGATAATATGGGTAGAAAAGAGGCTATTGGTCAGTGTTCTGGCTCATCAGTTCAGCCAGATTTACCAACAATGCTTAGGAAAGAGAATGAAGTGTCTAAAGCATGTGAGCACAAGCTGGATGCAAATCAATCTGAGGTTGCAGGAGAGAGGGCATGCGGGCTTTGCTTCTGGGTCTGA 2595 0.4289 MLKSEIAKITDKGGLVDFEGVERLVQLMQPDSGDKKIDLAGRIMLVDVIALTDRYECLGRFVQLRGLPVLDEWLQEVHKGKIGDANMPKESDKSVEDFLLALLRALDKLPVNLHALQTCNVGKSVNHLRTHKNSEIQRKARSLVDTWKRRVEAEMNMTDSKSGSNRAVSWQAKPANAESPHVGNRKTGGSSDNVAKSSSIQPSISKNSQSKLSSGEALSKSSSSPGSTKSMTTSAGSNSKDQNSKVLVGAATSDLPLTPIKEERSSSSSQSQNNSISCSSENAKTIGSCREDAKSSTAVSTSVGKIPGGGSRTRKSSNGLHGAGVAVGPKEHSSAKNSTRNSPSEKVSPTRVSHEKSADQPVTDQGNNQRLILRLPNTGRSPSRGASGGSFEDPAIMCCKASSADRNENQDRRVKTKTECLLTHLSNMMNEACDASDGLLGVEEGKCHPMVDERCRANEDGDKVAETSKPTSLSSGFFSRSGQTYDTSLSPMNALVESCVKISEASASVSHGDDGMNLLATVAAGEISRSENASPLASPERKFPAADELSSGNDFKLKHSGEAAVRTLSQLDGGATAEQPLNTVDPLQVKNDSRHPATTISHDFSGDGETISSNCVEKSGDGRTQINSSPTDLLQNAEGPCLRPETKEDTSETMLSAKKETNADPGGSDSKLKSMTSSFDDDQMVDHMMEETIENEKMVVSKAVASVKSENESDEKQPELSSGVDNENQVSAEKATGTGILVQKASPVAENCESIYLKKESPTSGNAVMISRDENADDMKSVVVELDERRMEQDLSVADDVNECAEDNMGRKEAIGQCSGSSVQPDLPTMLRKENEVSKACEHKLDANQSEVAGERACGLCFWV 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02604 864 MobiDBLite consensus disorder prediction 572 635 - -
Pumo2g02604 864 MobiDBLite consensus disorder prediction 572 677 - -
Pumo2g02604 864 MobiDBLite consensus disorder prediction 259 318 - -
Pumo2g02604 864 MobiDBLite consensus disorder prediction 183 249 - -
Pumo2g02604 864 Pfam TFIIS helical bundle-like domain 102 151 IPR017923 -
Pumo2g02604 864 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 20 155 IPR035441 -
Pumo2g02604 864 MobiDBLite consensus disorder prediction 332 385 - -
Pumo2g02604 864 MobiDBLite consensus disorder prediction 155 392 - -
Pumo2g02604 864 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 853 - -
Pumo2g02604 864 MobiDBLite consensus disorder prediction 704 728 - -
Pumo2g02604 864 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 56 165 IPR035441 -
Pumo2g02604 864 MobiDBLite consensus disorder prediction 530 557 - -
Pumo2g02604 864 CDD TFIIS_I 76 152 - -
Pumo2g02604 864 ProSiteProfiles TFIIS N-terminal domain profile. 68 154 IPR017923 -
Pumo2g02604 864 MobiDBLite consensus disorder prediction 157 172 - -
Pumo2g02604 864 SMART TFS2_5 74 153 IPR003617 GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02604 Pumo-Chr2 56923581 56926175 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Pumo2g02604 Med26 7.8e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02604 - - gmx:112998769 1390.94