Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo2g02604 | ATGTTAAAGTCTGAGATTGCTAAAATAACTGATAAAGGTGGGCTTGTGGACTTTGAAGGAGTTGAAAGACTGGTACAGCTTATGCAACCTGATAGTGGTGATAAAAAAATAGATTTGGCAGGGCGGATAATGCTTGTCGATGTAATTGCACTTACGGACCGGTATGAATGTCTAGGCAGGTTTGTACAACTCAGGGGTTTGCCTGTGTTGGATGAATGGCTGCAGGAGGTCCACAAGGGCAAAATTGGTGATGCAAATATGCCTAAAGAAAGTGATAAGTCTGTTGAAGATTTTTTGTTAGCTTTACTTCGTGCGTTGGATAAGCTTCCTGTGAACCTTCATGCACTGCAAACCTGTAATGTTGGAAAGTCTGTTAATCATTTACGCACCCACAAAAATTCTGAAATTCAGAGGAAAGCTAGGAGTTTAGTGGACACATGGAAGAGACGCGTGGAAGCTGAAATGAATATGACTGATTCGAAGTCTGGTTCAAACCGTGCCGTTTCTTGGCAAGCAAAGCCAGCAAATGCTGAGTCTCCTCATGTTGGAAATAGGAAAACAGGAGGATCCTCTGATAATGTTGCGAAGAGCTCTTCAATTCAACCCTCAATATCTAAAAATTCCCAATCTAAGTTAAGTTCTGGAGAAGCATTGTCCAAGTCCTCTTCATCTCCTGGCTCAACTAAATCAATGACTACCTCAGCGGGCAGTAACTCAAAAGATCAAAACAGTAAAGTCTTGGTTGGAGCCGCAACATCAGATCTACCGCTGACACCTATCAAGGAGGAGAGGAGCAGCAGTTCTAGTCAATCTCAAAATAACAGTATATCTTGTTCTAGTGAAAATGCTAAAACTATTGGTTCTTGCAGGGAAGATGCGAAGAGCTCGACTGCAGTGTCAACGAGTGTGGGCAAAATTCCTGGTGGTGGGTCTCGAACTCGCAAGTCAAGCAATGGTCTACATGGGGCTGGTGTTGCAGTAGGCCCGAAGGAGCACAGCTCTGCAAAAAATTCAACTAGAAATTCACCTTCTGAAAAAGTTTCACCAACTCGAGTCTCCCATGAAAAATCCGCTGACCAGCCCGTTACTGATCAAGGGAATAATCAGCGATTGATTCTCAGGTTGCCAAACACTGGTCGCAGTCCTTCAAGGGGAGCCAGCGGTGGCTCTTTTGAAGATCCAGCTATCATGTGCTGCAAAGCTTCATCTGCTGACAGGAATGAGAATCAGGACAGAAGAGTGAAAACCAAAACTGAGTGTTTGCTGACCCATTTGTCAAATATGATGAATGAGGCATGTGATGCTAGTGATGGTTTGCTTGGTGTTGAAGAAGGTAAGTGCCATCCAATGGTTGATGAGCGATGCAGGGCAAATGAAGATGGTGATAAGGTGGCAGAAACATCAAAACCAACTAGTTTGTCATCTGGATTTTTTTCCAGATCAGGGCAGACTTATGATACTTCTTTAAGCCCCATGAATGCATTAGTTGAAAGCTGTGTGAAAATTTCTGAAGCAAGTGCATCTGTGTCCCATGGAGATGATGGGATGAACCTACTAGCTACTGTGGCTGCAGGGGAAATATCAAGATCTGAAAATGCTTCACCTTTGGCATCCCCCGAGAGAAAGTTTCCTGCTGCAGATGAATTGAGCTCAGGCAATGATTTCAAGTTAAAACATTCTGGTGAAGCAGCTGTTCGCACTCTTTCACAGTTGGATGGTGGGGCTACTGCAGAGCAGCCTTTGAATACAGTTGATCCATTGCAGGTAAAAAATGATTCAAGGCATCCTGCTACGACAATATCACATGATTTTTCAGGAGATGGTGAAACCATTTCATCCAATTGTGTAGAGAAAAGTGGTGATGGTAGAACTCAGATAAATAGCTCCCCTACAGATTTGTTACAAAATGCTGAAGGTCCATGCTTACGGCCTGAAACCAAAGAGGATACTTCTGAAACTATGTTGTCAGCTAAAAAGGAGACTAATGCAGACCCTGGAGGTTCAGACTCTAAATTAAAGTCAATGACTTCCTCTTTTGATGATGATCAGATGGTTGATCACATGATGGAGGAAACCATTGAGAATGAGAAAATGGTGGTTTCAAAAGCTGTTGCAAGTGTTAAGTCTGAAAATGAATCAGATGAAAAACAACCTGAGTTATCCTCAGGTGTGGATAATGAGAACCAGGTTAGTGCAGAGAAAGCAACTGGTACTGGTATACTAGTGCAAAAGGCCTCTCCAGTTGCAGAAAACTGTGAGTCTATATATTTAAAAAAGGAGTCACCTACTTCTGGTAATGCTGTAATGATATCCAGGGATGAAAATGCTGATGACATGAAGTCAGTTGTGGTTGAGCTTGATGAAAGACGAATGGAGCAGGATTTATCAGTTGCAGATGATGTTAACGAATGTGCTGAAGATAATATGGGTAGAAAAGAGGCTATTGGTCAGTGTTCTGGCTCATCAGTTCAGCCAGATTTACCAACAATGCTTAGGAAAGAGAATGAAGTGTCTAAAGCATGTGAGCACAAGCTGGATGCAAATCAATCTGAGGTTGCAGGAGAGAGGGCATGCGGGCTTTGCTTCTGGGTCTGA | 2595 | 0.4289 | MLKSEIAKITDKGGLVDFEGVERLVQLMQPDSGDKKIDLAGRIMLVDVIALTDRYECLGRFVQLRGLPVLDEWLQEVHKGKIGDANMPKESDKSVEDFLLALLRALDKLPVNLHALQTCNVGKSVNHLRTHKNSEIQRKARSLVDTWKRRVEAEMNMTDSKSGSNRAVSWQAKPANAESPHVGNRKTGGSSDNVAKSSSIQPSISKNSQSKLSSGEALSKSSSSPGSTKSMTTSAGSNSKDQNSKVLVGAATSDLPLTPIKEERSSSSSQSQNNSISCSSENAKTIGSCREDAKSSTAVSTSVGKIPGGGSRTRKSSNGLHGAGVAVGPKEHSSAKNSTRNSPSEKVSPTRVSHEKSADQPVTDQGNNQRLILRLPNTGRSPSRGASGGSFEDPAIMCCKASSADRNENQDRRVKTKTECLLTHLSNMMNEACDASDGLLGVEEGKCHPMVDERCRANEDGDKVAETSKPTSLSSGFFSRSGQTYDTSLSPMNALVESCVKISEASASVSHGDDGMNLLATVAAGEISRSENASPLASPERKFPAADELSSGNDFKLKHSGEAAVRTLSQLDGGATAEQPLNTVDPLQVKNDSRHPATTISHDFSGDGETISSNCVEKSGDGRTQINSSPTDLLQNAEGPCLRPETKEDTSETMLSAKKETNADPGGSDSKLKSMTSSFDDDQMVDHMMEETIENEKMVVSKAVASVKSENESDEKQPELSSGVDNENQVSAEKATGTGILVQKASPVAENCESIYLKKESPTSGNAVMISRDENADDMKSVVVELDERRMEQDLSVADDVNECAEDNMGRKEAIGQCSGSSVQPDLPTMLRKENEVSKACEHKLDANQSEVAGERACGLCFWV | 864 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo2g02604 | 864 | MobiDBLite | consensus disorder prediction | 572 | 635 | - | - | |
Pumo2g02604 | 864 | MobiDBLite | consensus disorder prediction | 572 | 677 | - | - | |
Pumo2g02604 | 864 | MobiDBLite | consensus disorder prediction | 259 | 318 | - | - | |
Pumo2g02604 | 864 | MobiDBLite | consensus disorder prediction | 183 | 249 | - | - | |
Pumo2g02604 | 864 | Pfam | TFIIS helical bundle-like domain | 102 | 151 | IPR017923 | - | |
Pumo2g02604 | 864 | Gene3D | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 20 | 155 | IPR035441 | - | |
Pumo2g02604 | 864 | MobiDBLite | consensus disorder prediction | 332 | 385 | - | - | |
Pumo2g02604 | 864 | MobiDBLite | consensus disorder prediction | 155 | 392 | - | - | |
Pumo2g02604 | 864 | PANTHER | BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED | 1 | 853 | - | - | |
Pumo2g02604 | 864 | MobiDBLite | consensus disorder prediction | 704 | 728 | - | - | |
Pumo2g02604 | 864 | SUPERFAMILY | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 56 | 165 | IPR035441 | - | |
Pumo2g02604 | 864 | MobiDBLite | consensus disorder prediction | 530 | 557 | - | - | |
Pumo2g02604 | 864 | CDD | TFIIS_I | 76 | 152 | - | - | |
Pumo2g02604 | 864 | ProSiteProfiles | TFIIS N-terminal domain profile. | 68 | 154 | IPR017923 | - | |
Pumo2g02604 | 864 | MobiDBLite | consensus disorder prediction | 157 | 172 | - | - | |
Pumo2g02604 | 864 | SMART | TFS2_5 | 74 | 153 | IPR003617 | GO:0005634 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo2g02604 | Pumo-Chr2 | 56923581 | 56926175 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | IWS1 | Pumo2g02604 | Med26 | 7.8e-12 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo2g02604 | - | - | gmx:112998769 | 1390.94 |