Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02600 ATGTCGCAGCAAGGGTTCGCAATCGAGCTATACTTAGATCCAGCGTTGGAAAACCAGGTTCTGAAAGCGTGGAACGTTCTCGCACGAAGACAAATCAGCACGCACCTAATCGAAATGGAGTCTCGGCCTCACATAACCCTATTCTCCGCACCCTTTCTAGAACCTTCCAAGCTCGAATCTCTCTTAAAGACCTTCGCCTCGAAGCACGACCCTCTCCCTCTCACTTTCTCTTCCGTCGGCACTTTCCCCAACGACACCAACAACCTCCTCTTCCTCGCCCCAACCCCCTCCCTCTCACTCCTCCACTTTCAGTCACAGCTCTGTGACGCTATCAAAAAGGAAGGCATCGAAATTGGTGACGAATACGCCTTCAATTCCTGGATCCCTTATTGCTCCGTTGCTCACCATGTCCCCAAAAACAGAATGCCAGAGGCTTTCTCTCTCTTGAGGGAACTCAAACTCCCCGTTTCCGGTTACGCTATGGATATCGCTCTCGTACAGTTCTCTCCGGTTCGCGAACTCTTCTCCTTTGTGCTCGGCAACAATAGTTGA 552 0.5109 MSQQGFAIELYLDPALENQVLKAWNVLARRQISTHLIEMESRPHITLFSAPFLEPSKLESLLKTFASKHDPLPLTFSSVGTFPNDTNNLLFLAPTPSLSLLHFQSQLCDAIKKEGIEIGDEYAFNSWIPYCSVAHHVPKNRMPEAFSLLRELKLPVSGYAMDIALVQFSPVRELFSFVLGNNS 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02600 183 PANTHER - 2 182 - -
Pumo2g02600 183 Pfam 2'-5' RNA ligase superfamily 42 166 - -
Pumo2g02600 183 Gene3D Cyclic phosphodiesterase 6 180 - -
Pumo2g02600 183 SUPERFAMILY LigT-like 6 138 IPR009097 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02600 Pumo-Chr2 56907906 56911280 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02600 4 181 Calmodulin-binding Proteins AT5G40190 66.292 1.08e-82 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02600 - - gmx:100802388 347.821