Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02599 ATGTCGCAGCAGCAAGGGTTCGCGATCGAGTTATACTTAGACCCAGCGCTGGAGAACCAGGTTCTGAAGGCGTGGAACGTGCTCGCGCGAAGACAAATCAGCACGCACCTAATCGAAATGGAGTCTCGGCCTCACATAACCCTATTCTCTGCACCCTTTCTAGAACCTTCCAAGCTCGAATCTCTCTTAAAGACCTTCGCCTCGAAGCACGACCCTCTCCCTCTCACTTTCTCTTCCGTCGGCACTTTCCCCAACGACACCAACAACCTCCTCTTCCTCGCCCCAACCCCCTCCCTCTCACTCCTCCACTTTCAGTCACAGCTCTGTGACGCTATCAAAAAGGAAGGCATCGAAATCGCCGACGAATACGCCTTCAATTCCTGGATCCCTTACTGCTCCGTCGCTCACCATGTCCCCAAAAACAGAATGCCATGA 435 0.5333 MSQQQGFAIELYLDPALENQVLKAWNVLARRQISTHLIEMESRPHITLFSAPFLEPSKLESLLKTFASKHDPLPLTFSSVGTFPNDTNNLLFLAPTPSLSLLHFQSQLCDAIKKEGIEIADEYAFNSWIPYCSVAHHVPKNRMP 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02599 144 PANTHER - 3 143 - -
Pumo2g02599 144 Pfam 2'-5' RNA ligase superfamily 43 139 - -
Pumo2g02599 144 SUPERFAMILY LigT-like 7 136 IPR009097 -
Pumo2g02599 144 Gene3D Cyclic phosphodiesterase 7 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02599 Pumo-Chr2 56904895 56906395 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02599 5 143 Calmodulin-binding Proteins AT5G40190 63.309 6.13e-59 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02599 - - gmx:100802388 275.018