Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02586 ATGCAGGTCATGGCCTCTAGAATTCTTTCCACTCTGCATTATGTGTCTTCTTCTTCAGCCTCAGCCACTAAACGTTGTTTAGGCCTATGTAGTAGTCGTTGGCAGAGAAGTATAAGTGGAATTGGTGCTTCTAATGCTGCTGCTGATGTGGAGCCTAGCACAGCACCTGTGCAAATTGATCATAGTCAGCTTCTAATTGATGGACAATTTGTTGATGCAGCTTCTGGAAAAACTTTTCCAACCTTTGATCCCAGAACTGGAGATGTAATTACCAATGTTGCTGAAGGTGACACTGAAGATGTAAATCGTGCTGTCTGTGCTGCTCGCAAGGCTTTTGATGAGGGACCATGGCCAAAGTTGACAGCTTATGAAAGATCACGTATAATTTTGCGCTTTGCTGATTTATTGGAGAAACACAATGATGAAGTTGCAGCAATTGAAACATGGGATAGTGGGAAGACTTATGAACAGGCTGCAAATGTTGAAATACCTATGGTGGTACGCTTGTTCCGATATTATGCAGGTTGGGCGGATAAAATTCACGGTCTAACAGTTCCAGCTGATGGACCATACCTTGTGCAAACCTTGCATGAACCCATTGGTGTAGCAGGGCAGATTATTCCTTGGAATTTCCCACTTCTTATTTATTCATGGAAGGTTGCACCTGCATTAGCTTGTGGTAATACAGTTGTATTGAAAACTGCAGAGCAGACACCACTTTCTGCCCTTTATGTGTCAAAGCTATTTCTTGAGGCAGGACTTCCTCCTGGGGTTCTGAATGTTGTCACTGGCTTTGGTCCTACTGCTGGTGCAGCTCTGTGTAGCCATATGGATGTTGACAAGCTTGCTTTCACAGGATCCACTAGCACTGGTAAACGTGTGCTAGAACTTTCTGCACACAGCAACTTGAAGCCAGTAACTCTGGAGCTGGGTGGAAAATCTCCATTCATTGTGTGCAAGGATGCTGATGTTGATGAAGCTGTTGAGGCTGCACATTCTGCTTTATTCTTTAATCAGGGGCAATGTTGTTGTGCTGGTTCTCGCACATTTGTTCATGAAAGCGTGTATGATGAATTTGTGGAAAAGGCTAAAGCCCGTGCTCTTAAACGTGTAGTTGGAGACCCTTTCAAAAATGGGGTTGAGCAAGGTCCTCAGATTGATTCTGTGCAATTCGAGAAGATCTTGAAATACATAAGATCAGGCGTTGAAAGTGGTGCTACACTGGAATCTGGTGGTGAAAGAATTGGCTCCAAAGGCTACTACATCCAACCCACTGTTTTCTCAAATGACAGCATGTTGATAGCAAAAGATGAGATATTCGGTCCAGTACAATCTATCTTGAAATTCAAAGATCTAGAGGAGGTGATAAGAAGGGCTAATGCAACTTCCTATGGCCTGGCTGCTGGAGTTTTTACTCAAAATATTGACACTGCCAACACCTTGATGCGAGCATTGCGAGTTGGAACAGTATGGATCAACTGCTATGATGTCTTTGATGCAGCAATACCTTTTGGTGGATATAAGATGAGTGGACAAGGGAGAGTAAGGGGAATCTACAGCCTTAGAAGCTACCTTCAAGTTAAAGCTGCTGTCACTGCTTTGAAGAATCCCGCATGGCTGTAG 1623 0.4368 MQVMASRILSTLHYVSSSSASATKRCLGLCSSRWQRSISGIGASNAAADVEPSTAPVQIDHSQLLIDGQFVDAASGKTFPTFDPRTGDVITNVAEGDTEDVNRAVCAARKAFDEGPWPKLTAYERSRIILRFADLLEKHNDEVAAIETWDSGKTYEQAANVEIPMVVRLFRYYAGWADKIHGLTVPADGPYLVQTLHEPIGVAGQIIPWNFPLLIYSWKVAPALACGNTVVLKTAEQTPLSALYVSKLFLEAGLPPGVLNVVTGFGPTAGAALCSHMDVDKLAFTGSTSTGKRVLELSAHSNLKPVTLELGGKSPFIVCKDADVDEAVEAAHSALFFNQGQCCCAGSRTFVHESVYDEFVEKAKARALKRVVGDPFKNGVEQGPQIDSVQFEKILKYIRSGVESGATLESGGERIGSKGYYIQPTVFSNDSMLIAKDEIFGPVQSILKFKDLEEVIRRANATSYGLAAGVFTQNIDTANTLMRALRVGTVWINCYDVFDAAIPFGGYKMSGQGRVRGIYSLRSYLQVKAAVTALKNPAWL 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02586 540 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 66 322 - -
Pumo2g02586 540 SUPERFAMILY ALDH-like 60 532 IPR016161 GO:0016491
Pumo2g02586 540 CDD ALDH_F2BC 59 532 - -
Pumo2g02586 540 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 66 528 IPR016162 GO:0016491
Pumo2g02586 540 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 308 315 IPR029510 GO:0016491
Pumo2g02586 540 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 312 499 IPR016163 GO:0016620
Pumo2g02586 540 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 48 529 - -
Pumo2g02586 540 Pfam Aldehyde dehydrogenase family 70 529 IPR015590 GO:0016491
Pumo2g02586 540 FunFam Mitochondrial aldehyde dehydrogenase 2 314 501 - -
Pumo2g02586 540 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 336 347 IPR016160 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02586 Pumo-Chr2 56650480 56654271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02586 4 540 Aldehyde Dehydrogenase Gene Family AT3G48000 72.527 0.0 829
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02586 K00128 - gmx:100798892 989.949