Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02585 ATGATTCAAGTTGTGAAGAGGGAGACTGGGATGGGATCCTTCATAATAAGTGCTGTGGAGCAGCATTTGATGCTTACCTCTACGCTTCTCGGTTGGCGGGCAAATCAAACAGGAAAGATTTACTTGGATTCTACTGAGCAAAGAAATTGTCTGACTAGAATAAAGGGTTTTAATGATGATGTTTTTGGTTGTGGAATTGAGAACCTAACAAGTGGTGCTGGTGGATGTTCTGACTTGTTGGTTGCTGATGTTTGGAATAAATCAGGAAATGAGCTTAGAAGTTTAGATGAAAACTGTCAACAGTCATGTTCTTTGTGCCTGAGGACCTGGAATACAATAGGTGGGATATATTCCAGAAAGACCAACGTCAAAACTGAAAAAAATGAAGCTGATCTCTGTAGAATTGCTGTACTTGTGACATTGATAAGCAGCAAAATTGAAAATGTGATGTATGTCAAAACAGTTCTGAGATGCCTTGGAGCACAACATATTTATTCAGGTAAGGTCTATAAGGGTACATTGACAAATAATCAGCATGTTGCAATAAAGCACATAATCAATGATGATGGAAATGTGGACACTTTTGTCAGAGAAGTTACATGCTTATCTCATGTCAGACACCCAAATCTTGTTGCTTTGCTGGGTTGCTGTGTTGAGGGAGATGAATGTTTTCTGGTTTATGAACTATGTCCCAATGGGAGCCTTTCAGAATGGCTATTTGGCAAGGACAAGGTGCTATCCTGGATACAAAGGCTAGAAATTGCAATTGATAGTGCTCGTGGTCTTTGGTTCTTACATACATATCGAGGAGGATGCATTGTTCACCGTGATATCAAGCCAACAAATATTCTTCTGGGGTCCAAATTTGAGGCAAAGCTATCAGACTTTGGACTGTCTAAAGTTCTTGAGGTGGGTGAAACAGATGTTAGCTCTGAAGTGAGAGGAACATTTGGATACGTTGATCCTGAGTACCAAAGCAACCACCATGTGAATTCATCCGGTGATGTTTACAGCTTTGGAATGGTACTTCTACAAATCCTCTCAGGAAAGAAGGTTATAAATTTGAAACTGAAGAAACCAATGTCACTGAACAAAGTGGCAAAAGCACTCACCAGGGATGGCAGCATAACAGGGTTTGCTGACCCTAAACTTCAAGGAGAGTACTCTGAAGAAGCATTTGATTTTACACTTAAACTAGCTCTATCATGTACAGCCCTCAACCAACAACGTCCATCCATGGAGCAGGTTGTCAAAAGACTAGAAGAGGCTCTATTCATTTCAAAAGGGAGGAAGGCTTCTACTACAGAAACTCCAGCAGACAATATTTCTAATCCATAA 1338 0.4028 MIQVVKRETGMGSFIISAVEQHLMLTSTLLGWRANQTGKIYLDSTEQRNCLTRIKGFNDDVFGCGIENLTSGAGGCSDLLVADVWNKSGNELRSLDENCQQSCSLCLRTWNTIGGIYSRKTNVKTEKNEADLCRIAVLVTLISSKIENVMYVKTVLRCLGAQHIYSGKVYKGTLTNNQHVAIKHIINDDGNVDTFVREVTCLSHVRHPNLVALLGCCVEGDECFLVYELCPNGSLSEWLFGKDKVLSWIQRLEIAIDSARGLWFLHTYRGGCIVHRDIKPTNILLGSKFEAKLSDFGLSKVLEVGETDVSSEVRGTFGYVDPEYQSNHHVNSSGDVYSFGMVLLQILSGKKVINLKLKKPMSLNKVAKALTRDGSITGFADPKLQGEYSEEAFDFTLKLALSCTALNQQRPSMEQVVKRLEEALFISKGRKASTTETPADNISNP 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02585 445 Gene3D Transferase(Phosphotransferase) domain 1 234 438 - -
Pumo2g02585 445 SMART serkin_6 153 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g02585 445 Coils Coil 403 423 - -
Pumo2g02585 445 FunFam probable receptor-like protein kinase At5g59700 230 438 - -
Pumo2g02585 445 Pfam SPARK 25 133 IPR043891 -
Pumo2g02585 445 ProSiteProfiles Protein kinase domain profile. 135 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g02585 445 ProSitePatterns Serine/Threonine protein kinases active-site signature. 273 285 IPR008271 GO:0004672|GO:0006468
Pumo2g02585 445 Gene3D Phosphorylase Kinase; domain 1 157 233 - -
Pumo2g02585 445 Pfam Protein kinase domain 166 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g02585 445 SUPERFAMILY Protein kinase-like (PK-like) 166 421 IPR011009 -
Pumo2g02585 445 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 166 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02585 Pumo-Chr2 56644083 56646845 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02585 167 436 Receptor kinase-like Gene Family AT2G28970 42.545 1.46e-56 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Pumo2g02585 Pkinase 1e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02585 - - gmx:102663798 522.702