Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02573 ATGAAGAAGAGTGAGAGTGGGGGGTATGTGAGAGCGGATCAGATAGATCTGAAGAGCTTGGATGAGCAGCTTCAGAGGCATCTGAGTAGAGCATGGACTATGGAGAAGAACAAGGAGAAGGAGGAAGATGAGGTTGAAGGAAGGTCCACAAGAAGCAGACAAGAATGGGAGATTGACCCCTCTAAGCTCGTCATCAAGACTGTCATTGCTCGTGGCACTTTTGGCACTGTTCATCGTGGGATTTATGATGGCCATGATGTTGCAGTTAAGCTCCTTGACTGGGGGGAAGAGGGACATCGATCAGAGGCTGAAATAGCTTCTTTGAGAGCGGCTTTTACTCAAGAAGTTGCTGTTTGGCACAAGCTTGACCATCCTAATGTAACCAAGTTTCTTGGAGCAACAATGGGAACATCAGAGCTACAGATACAAACGGAAAATGGTCATGTAGGCATGCCGAGTAATGTCTGTTGTGTTGTTGTCGAATATTGTCCTGGGGGCGCGCTGAAGTCTTATCTCATTAAAAACCGAAGAAGAAAGCTGGCTTTTAAAGTGGTTGTTCAACTGGCTCTTGACCTTGCAAGAGGGTTGAGCTATCTCCACACAAAGAAGATTGTCCACAGAGATGTTAAAACAGAAAATATGCTTCTGGACAAGACACGAACCTTGAAAATAGCTGATTTTGGAGTAGCTCGTATTGAGGCTTCCAATCCTCATGACATGACAGGTGAAACTGGAACCCTTGGTTACATGGCTCCTGAGGTATATGCTTCAATTCCTTTGAAAATTTCTCTCTCCTGTGCATTATTCTTTTGGGTACTAAATGGTAATCCATACAATAGAAAGTGTGATGTGTACAGTTTCGGCATATGCTTATGGGAGATATACTGCTGTGACATGCCATATCCTGACCTTAGCTTCTCAGAAGTGACGTCAGCTGTCGTACGACAGAATTTGAGGCCAGAGATTCCGCGATGTTGTCCTAGCTCTCTGGCAAATGTGATGAAAAGATGCTGGGATGCAAATCCTGATAAGAGGCCAGAGATGGATGAAGTGGTGACCATGTTGGAAGCTATTGACACTTCAAAGGGTGGAGGCATGATCCCTCATGATCAGCCTCAGGGTTGTTTATGTTTTCGCAGGAATAGGGAAGGAAGACTCAAGGATGGAATGCATACACAAAAAGTGTGA 1188 0.4487 MKKSESGGYVRADQIDLKSLDEQLQRHLSRAWTMEKNKEKEEDEVEGRSTRSRQEWEIDPSKLVIKTVIARGTFGTVHRGIYDGHDVAVKLLDWGEEGHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFLGATMGTSELQIQTENGHVGMPSNVCCVVVEYCPGGALKSYLIKNRRRKLAFKVVVQLALDLARGLSYLHTKKIVHRDVKTENMLLDKTRTLKIADFGVARIEASNPHDMTGETGTLGYMAPEVYASIPLKISLSCALFFWVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVTMLEAIDTSKGGGMIPHDQPQGCLCFRRNREGRLKDGMHTQKV 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02573 395 SMART serkin_6 63 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g02573 395 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 54 358 - -
Pumo2g02573 395 ProSiteProfiles Protein kinase domain profile. 63 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g02573 395 CDD STKc_MAP3K-like 69 355 - -
Pumo2g02573 395 SUPERFAMILY Protein kinase-like (PK-like) 47 355 IPR011009 -
Pumo2g02573 395 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Pumo2g02573 395 MobiDBLite consensus disorder prediction 31 53 - -
Pumo2g02573 395 Pfam Protein tyrosine and serine/threonine kinase 64 355 IPR001245 GO:0004672|GO:0006468
Pumo2g02573 395 Gene3D Phosphorylase Kinase; domain 1 51 146 - -
Pumo2g02573 395 Gene3D Transferase(Phosphotransferase) domain 1 163 371 - -
Pumo2g02573 395 FunFam Kinase suppressor of Ras 1 52 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02573 Pumo-Chr2 56516706 56521230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02573 11 382 MAP Kinase Kinase Kinase AT3G22750 65.691 0.0 524
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Pumo2g02573 PK_Tyr_Ser-Thr 9.3e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02573 - - gmx:100796762 718.768