Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02559 ATGGAGAACTCGGACTCGGAGAAGGTGGTGGCTGTGATCATGGTGGGTGGACCCACCAAAGGGACCAGATTTCGGCCTCTTTCCTTCAATATTCCCAAACCGCTTTTCCCTTTGGCTGGCCAGCCAATGGTTCACCATCCTATTTCTGCTTGTAAAAAGATACCCAATTTGGCTCAAATATTTCTCATTGGATTCTATGAGGAGCGAGAATTCGCTCTATATGTCTCTTCAATCTCGAATGAGCTGAAATTACCAGTAAGATATTTGAAGGAGGATAAACCGCATGGTTCAGCAGGTGGCCTTTACTACTTTAGAGATATTATCATGGAAGACAGCCCGTCACATATCTTTCTGTTGAATTGTGATGTTTGCTGCAGTTTTCCACTACCATCAATGCTTGATGCCCATAAAAGATATGGTGGGATGGGGACAATGTTGGTAATCAAGGTTTCAGCTGAATCTGCTAGCCAGTTCGGTGAGTTGGTTGCTGATCCAACCACTAATGAGTTGCTGCATTATACTGAGAAACCTGAGACATTTGTCAGCGATTTGATAAACTGCGGTGTCTATGTTTTCACCCCTGATATTTTTACTGCCATCCACAATGTATATATCAATCAAGAAGGCAGAGCTAATCTACGTCGTGTCTCCAGCTTTGAAACACTCCAATCTGCCATGAGGACTACTCCTGTAGATTTTGTAAGATTGGATCAAGATATATTATCTCCTCTAGCTGGAAAGAAGCAACTGTATACATATGAGACAATGGATTTCTGGGAGCAAATTAAAACTCCAGGAATGTCATTGAAATGCTCAGAATTGTATCTTGTTCAATTCCGGTATACTTCACCTGATCTTTTGGCCAGTGGAGATGGTAAAAAGAAAGCTACAATTGTTGGTGATGTATATATTCATCCATCTGCCAAAGTCCATCCATCTGCAAAGATTGGTCCCAATGTTTCTATCTCAGCAAACGTTCGCGTAGGTGCTGGCGTCAGGTTAAGCGGTTGTATCATCTTGGATGATGTTGAAATTAAGGAAAATGCTTTTGTCACAAACTCCATTGTTGGATGGAAGTCATCACTTGGAAGATGGTCACATGTGCAGGCTGATGGTAACTACGATGCAAAACTTGGCACAACCATCCTAGGTGAAGCTGTAACGGTTGAAGATGAAGTAGTAGTGTTCAACTGCATTGTTCTTCCCAATAAGACTCTTAATGTCAGTGTGCAAGAAGAAATCATCTTATAA 1251 0.4173 MENSDSEKVVAVIMVGGPTKGTRFRPLSFNIPKPLFPLAGQPMVHHPISACKKIPNLAQIFLIGFYEEREFALYVSSISNELKLPVRYLKEDKPHGSAGGLYYFRDIIMEDSPSHIFLLNCDVCCSFPLPSMLDAHKRYGGMGTMLVIKVSAESASQFGELVADPTTNELLHYTEKPETFVSDLINCGVYVFTPDIFTAIHNVYINQEGRANLRRVSSFETLQSAMRTTPVDFVRLDQDILSPLAGKKQLYTYETMDFWEQIKTPGMSLKCSELYLVQFRYTSPDLLASGDGKKKATIVGDVYIHPSAKVHPSAKIGPNVSISANVRVGAGVRLSGCIILDDVEIKENAFVTNSIVGWKSSLGRWSHVQADGNYDAKLGTTILGEAVTVEDEVVVFNCIVLPNKTLNVSVQEEIIL 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02559 416 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 10 416 - -
Pumo2g02559 416 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 277 IPR029044 -
Pumo2g02559 416 FunFam Putative GDP-mannose pyrophosphorylase 285 413 - -
Pumo2g02559 416 Pfam Nucleotidyl transferase 11 219 IPR005835 GO:0009058
Pumo2g02559 416 FunFam Mannose-1-phosphate guanyltransferase alpha 8 279 - -
Pumo2g02559 416 SUPERFAMILY Nucleotide-diphospho-sugar transferases 9 358 IPR029044 -
Pumo2g02559 416 Gene3D Hexapeptide repeat proteins 288 413 - -
Pumo2g02559 416 CDD M1P_guanylylT_A_like_N 11 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02559 Pumo-Chr2 55525998 55533208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02559 21 356 Eukaryotic Initiation Factors Gene Family AT2G34970 21.795 8.25e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02559 K00966 - gmx:100782402 799.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g02559 2 55525998 55533208 Pumo2g02559 2 55525998 55533208 ECH