Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02547 ATGCAATTGTTTCATAAACCAATGTCTTTCCTTAAAATCTTGTTTGTTACTTGTTTCTTTTGTCTTGGTAAAGCCATAGATTGCGGTGGGAAGAATGTTACACAAATCATCACTGTTGGTCGATATGGCAAAGTAGCATTTAGAACAATTCAAGCAGCCATTGATTCTATAAAGAGTAACAATGATCGATGGGTCAAGATTCACATAAACGCCGGCTTATACATAGAAAGGGTTAATATTCCCCTAGAAAAACCATGCATCATTTTAGAAGGAGAGGGTAGCAAGAACACAATTATAAGTTTCGGGGACCATCAAGGAACAAGCAATAGCTCTACATTCACTTCATCTCCATCTAATGTGGTTGTGAGTGACATTACTTTCAAGAACTCATATGTTAATGGACCAGCAGTGGCAACGAGTGTATATGGAGACAAATCTTTCTTCTTTAAGTGTAATTTTATAGGTTATCAAGACACTTTGTTTGATGCAATTGGACGTCATTACTTTAAAGATTGCTACATTGAAGGTGCAGTGGACTTTATTTTTGGTGCTGGACAATCTTATTACGAGAATTGTTGGATAAACACTGTGGGGCCAGGTTCTGTCACAGCTCAAGCACGAGATTCATCAGATGACCCAAGTGGTTTTGTATTTGAAGGGGGTTCCATCACAGGGAATGGTAAAGTGAATTTAGGAAGAGCATGGCGTGCTTACTCTAGAGTTATATTTCATGGAACATATTTTTCTTCCATTGTAACTCCTCAAGGATGGAATGCTTGGAGTTATGTTGGCCAAGAGTAA 801 0.3808 MQLFHKPMSFLKILFVTCFFCLGKAIDCGGKNVTQIITVGRYGKVAFRTIQAAIDSIKSNNDRWVKIHINAGLYIERVNIPLEKPCIILEGEGSKNTIISFGDHQGTSNSSTFTSSPSNVVVSDITFKNSYVNGPAVATSVYGDKSFFFKCNFIGYQDTLFDAIGRHYFKDCYIEGAVDFIFGAGQSYYENCWINTVGPGSVTAQARDSSDDPSGFVFEGGSITGNGKVNLGRAWRAYSRVIFHGTYFSSIVTPQGWNAWSYVGQE 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02547 266 Gene3D - 30 266 IPR012334 -
Pumo2g02547 266 SUPERFAMILY Pectin lyase-like 36 262 IPR011050 -
Pumo2g02547 266 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 30 264 - -
Pumo2g02547 266 Pfam Pectinesterase 37 261 IPR000070 GO:0030599|GO:0042545
Pumo2g02547 266 ProSitePatterns Pectinesterase signature 2. 174 183 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02547 Pumo-Chr2 55393885 55395991 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02547 9 266 Carbohydrate Esterase AT2G19150 43.431 9.48e-73 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02547 - - var:108336510 353.984