Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo2g02538 | ATGGATCGCAGCAACGCGTCTTCCTCTTCGCTCCTTCTGTTGAGCTTGTTGGGGTTTCAGCTTTTCTTCTTCTTTGCTTCGTCGCAGGGCGAAGACTACGTGACATGTCTCCGTGGCATCAAGGACTCTGTCTCCGACCCTCAGAATCGGCTCTCCAATTGGCGGTTCGACAACACAACCGTAGGTTTCATCTGCGACTTCGTGGGTGTGTCTTGCTGGAACGTGAGGGAGAACCGTGTCCTAGGTTTGGACCTCCAAGACTTCAAGCTTTCGGGTAAGATCCCCGAGGCTTTGAAGTACTGTGGGAAGAGCCTTCAAAGGTTGGATCTTGCTTCAAATTCTTTTTCTTCAGAGATCCCACATGAGATCTGTAGTTGGATGCCTTTTTTGGTCTCAATAGATTTGTCAAATAACCAACTTTCTGGGCCTATCCCCCCTACAATTGTGAATTGTTCTTATTTGAATGAGTTGGTGCTTTCAAATAACCAGCTCTCTGGCTCAATTCCCTTTGAGTTTGGGAGCTTAGGTAGGCTCAAGAAGTTTTCTGTGGCCAATAATAGGCTTAGTGGGACAATTCCTGACTTTCTCAATGGGTTTGATAGGGAGGGTTTTGAGGGGAATAGTGGGTTGTGTGGGGGTCCTCTTGGATCCAAGTGTGGTGGGATGAGTAAGAAGAATCTTGCTATTATTATTGCTGCTGGGGTGTTTGGTGCTGCTGCTTCATTGTTGCTGGCTTTTGGGTTGTGGTGGTGGTACCATTTGAGTGGGAAGAAGAAGAAGGGGTATGGGGTTGGTTCTGGTGTTGATGTTGGTGGTGCTGGTGCTGGTGATTGGGCTTTGAGGTTAAGAGGGTATAAGCTTGTGCAGGTTAGTCTCTTTCAGAAGCCTATTGTGAAGTTGAAGTTGGGGGATTTGATGGCTGCTACTAATAATTTCAGTGGGGAGAATGTTCTTTTCGCGACGAGGACTGGGACAACATATAAGGCTGATCTTCCGGATGGTTCCACGCTCGCTGTGAAGCGGTTGAGTGCTTGTAGGATTGGGGAGAAGCAGTTTGGGATGGAGATGAATCGGTTGGGGCAGGTTAGGCACCCAAATTTGGCGCCACTGTTGGGGTACTGTGTTGTGGAGGAGGAGAAGTTGTTGGTTTATAAGCACATGTCAAACGGGACGTTGTATTCGTTGTTGCATAAGAATAGTGGTGTGTTGGATTGGTTGATGAGGTTTAGGATTGGGTTGGGGGCGGCGAGGGGGCTTGCCTGGCTGCACCATGGGTGCCACCCTCCCATTATACAGCAGAACATTTGCTCCAATGTGATTCTTGTTGACGAGGAGTTTGATGCTCGATTGATGGACTTTGGGCTCGCGAGGCTCATGGCATCGGACTCGAATGGTAGTTTTGTGAATGGGGATTTGGGGGAGCTCGGGTACATTGCGCCTGAGTATCCGAGTACACTTGTTGCTTCATTGAAAGGGGATGTGTATGGGTTTGGAGTCTTGCTTTTGGAGTTGGTGACCGGGCGTAAACCTCTTGAGGTGAGCAATGGGGAGGAAGAGTTCAAGGGTAGCTTGGTGGATTGGGTGAATATGCATTCTAGTTCAGGCCGGATCAAGGATTGCATTGATAAAGCCATATGTGGAAGGGGACATGATGAGGAGATTCTGCAGTTTCTGAAAATCGCGTTGAATTGTGTGGTTTCTCGCCCCAAGGATAGGTGGTCTATGTACCAGGTTTATCATAACTTAAAGACCATATCCAAAGACCAGAGTTTCTTTGAACATGATGATGAATTCCCCTTGATCTTTGGTAAGCCAGAAAATGAGGTTGTGGCGTAG | 1836 | 0.4798 | MDRSNASSSSLLLLSLLGFQLFFFFASSQGEDYVTCLRGIKDSVSDPQNRLSNWRFDNTTVGFICDFVGVSCWNVRENRVLGLDLQDFKLSGKIPEALKYCGKSLQRLDLASNSFSSEIPHEICSWMPFLVSIDLSNNQLSGPIPPTIVNCSYLNELVLSNNQLSGSIPFEFGSLGRLKKFSVANNRLSGTIPDFLNGFDREGFEGNSGLCGGPLGSKCGGMSKKNLAIIIAAGVFGAAASLLLAFGLWWWYHLSGKKKKGYGVGSGVDVGGAGAGDWALRLRGYKLVQVSLFQKPIVKLKLGDLMAATNNFSGENVLFATRTGTTYKADLPDGSTLAVKRLSACRIGEKQFGMEMNRLGQVRHPNLAPLLGYCVVEEEKLLVYKHMSNGTLYSLLHKNSGVLDWLMRFRIGLGAARGLAWLHHGCHPPIIQQNICSNVILVDEEFDARLMDFGLARLMASDSNGSFVNGDLGELGYIAPEYPSTLVASLKGDVYGFGVLLLELVTGRKPLEVSNGEEEFKGSLVDWVNMHSSSGRIKDCIDKAICGRGHDEEILQFLKIALNCVVSRPKDRWSMYQVYHNLKTISKDQSFFEHDDEFPLIFGKPENEVVA | 611 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo2g02538 | 611 | Gene3D | Phosphorylase Kinase; domain 1 | 273 | 386 | - | - | |
Pumo2g02538 | 611 | FunFam | Inactive LRR receptor-like serine/threonine-protein kinase BIR2 | 30 | 220 | - | - | |
Pumo2g02538 | 611 | Pfam | Protein tyrosine and serine/threonine kinase | 333 | 527 | IPR001245 | GO:0004672|GO:0006468 | |
Pumo2g02538 | 611 | Pfam | Leucine rich repeat N-terminal domain | 35 | 73 | IPR013210 | - | |
Pumo2g02538 | 611 | ProSiteProfiles | Protein kinase domain profile. | 312 | 592 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo2g02538 | 611 | FunFam | Inactive LRR receptor-like serine/threonine-protein kinase BIR2 | 274 | 386 | - | - | |
Pumo2g02538 | 611 | SUPERFAMILY | L domain-like | 31 | 200 | - | - | |
Pumo2g02538 | 611 | SUPERFAMILY | Protein kinase-like (PK-like) | 289 | 582 | IPR011009 | - | |
Pumo2g02538 | 611 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 82 | 584 | - | - | |
Pumo2g02538 | 611 | Gene3D | Transferase(Phosphotransferase) domain 1 | 387 | 604 | - | - | |
Pumo2g02538 | 611 | Gene3D | Ribonuclease Inhibitor | 34 | 221 | IPR032675 | - | |
Pumo2g02538 | 611 | FunFam | Inactive LRR receptor-like serine/threonine-protein kinase BIR2 | 387 | 604 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo2g02538 | Pumo-Chr2 | 55155220 | 55157783 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo2g02538 | 17 | 610 | Receptor kinase-like Gene Family | AT3G28450 | 64.013 | 0.0 | 774 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-Xa | Pumo2g02538 | PK_Tyr_Ser-Thr | 2.4e-26 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo2g02538 | - | - | gmx:100810378 | 1064.29 |