Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g02514 ATGGGGTTTGGGAGTAATGCAGTTCAGGCAGGGAGTTTGGATGTGGACAAGTCAAAGGGAAGGAAGAACAAGGAAGGTGGTGGAAAGGAGAGAAAATGGTGGTTTAGATTTAGCTTCTTTGGGAGCTGCATACCTTCAGGATCAAACGTTGATAGCACCATAAGTGGCACTAGTGCCCATAATGGTAATTTTCTTTCACATCAACGTTCTTTATTTTCATACAATAAGTCAGGGAGTTTGGATGTGGACAAGTCAAAGCGAAGGAAGAACAAAGAAGGTGGTGGAAAGGAGAGAAAATGGTGGTTTAGATTTAGCTTCTTTGGGAGCTGCATACCTTCAGGATCAAAAGTTGATAGCACCATAAGTGGCACTAGTGCCCATAATGGTGAAAATGTCAAATCAGTGATAGTTGGGTCAGAGGAAAACAAACCTGCATCTGATAAAATCACAAAGGAAACAGTTGCTCCTCAAGAGTCCTCAACGACAACTAGTGATGCGGAAAGTAATCCTTCCACTCCGAAATTCAGTGAGGAGTTAAAGTTTGCTTCTTGTTTGAGAAAATTCACATTCAATGGGCTTAAGGTGGCAACTAGGAATTTCAGACCAGAGAGTCTTCTTGGTGAGGGAGGGTTTGGTTGTGTCTTCAAGGGTTGGATCGAGGAGAATGGAACTGCACCTGTGAAACCAGGTACTGGGCTTACGGTTGCGGTCAAGACCCTCAACCACAATGGACATCAGGGTCACAAAGAGTGGCTTGCTGAATTAAATTATCTTGGTGATCTTGTCCATCCTAATCTTGTTAAATTGATTGGTTTCTGTATTGAAGATGACCAGAGATTATTGGTTTATGAGTTTATGCCCCGAGGCAGTTTGGAGAACCACCTCTTTAGAAGGCCCCTGCCTCTTCCTTGGTCTATCAGAATGAAAATTGCACTTGGTGCTGCAAAAGGTCTTGCTTTTCTCCATGAAGAGGCTCAGAGGCCCATAATATATCGTGATTTCAAAACATCTAATATACTATTGGATGCGGAATACAATGCCAAGCTTTCTGATTTTGGACTTGCCAAAGATGGTCCTGAGGGGGAGAAGACACATGTATCGACAAGAGTTATGGGAACGTATGGTTATGCTGCTCCTGAGTACGTGATGACTGGACATTTGACATCAAAAAGTGATGTCTACAGCTTTGGAGTAGTGCTACTCGAAATGCTCACAGGCCGGCGATCTATTGATAAGAGAAGACCAAATGGGGAACACAATCTGGTGGAGTGGGCGAGACCGGTACTTGGAGACCGGCGGATGTTCTACCGGATCATCGATCCCCGCCTTGAAGGCCACTTCTCAGTTAAGGGGGCACAGAAAGCTGCCCAGCTGGCTGCTCAATGCCTTAGCCGCGATCCAAAATCCAGACCCTTGATGAGTGAAGTTGTTAAAGCTTTAAAGCCTTTGCCAAGCCTCAAGGACATGGCTATCTCATCTTACCACTTCCAAATTGCGCGAGTAGATCGAACCATGTCCATGCCAAATCATAAAAACGGTATTAGAACACAGTTAGTATCTGTACCAAGAAAGGGTCAACCTGTAAGGACATTGTCTAGTCCAAATGGTCCACGTGGTTCTCCATATCTTCATTTTACCAAGTCTCCAAAACCTATTGGATAA 1662 0.4428 MGFGSNAVQAGSLDVDKSKGRKNKEGGGKERKWWFRFSFFGSCIPSGSNVDSTISGTSAHNGNFLSHQRSLFSYNKSGSLDVDKSKRRKNKEGGGKERKWWFRFSFFGSCIPSGSKVDSTISGTSAHNGENVKSVIVGSEENKPASDKITKETVAPQESSTTTSDAESNPSTPKFSEELKFASCLRKFTFNGLKVATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHNGHQGHKEWLAELNYLGDLVHPNLVKLIGFCIEDDQRLLVYEFMPRGSLENHLFRRPLPLPWSIRMKIALGAAKGLAFLHEEAQRPIIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEGEKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSIDKRRPNGEHNLVEWARPVLGDRRMFYRIIDPRLEGHFSVKGAQKAAQLAAQCLSRDPKSRPLMSEVVKALKPLPSLKDMAISSYHFQIARVDRTMSMPNHKNGIRTQLVSVPRKGQPVRTLSSPNGPRGSPYLHFTKSPKPIG 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g02514 553 FunFam Serine/threonine-protein kinase BIK1 167 285 - -
Pumo2g02514 553 MobiDBLite consensus disorder prediction 132 174 - -
Pumo2g02514 553 Gene3D Phosphorylase Kinase; domain 1 184 285 - -
Pumo2g02514 553 Pfam Protein kinase domain 203 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g02514 553 CDD STKc_IRAK 206 483 - -
Pumo2g02514 553 FunFam Probable serine/threonine-protein kinase PBL8 286 499 - -
Pumo2g02514 553 PANTHER OS01G0588500 PROTEIN-RELATED 161 483 - -
Pumo2g02514 553 SUPERFAMILY Protein kinase-like (PK-like) 174 480 IPR011009 -
Pumo2g02514 553 ProSitePatterns Serine/Threonine protein kinases active-site signature. 329 341 IPR008271 GO:0004672|GO:0006468
Pumo2g02514 553 Gene3D Transferase(Phosphotransferase) domain 1 286 499 - -
Pumo2g02514 553 ProSitePatterns Protein kinases ATP-binding region signature. 206 238 IPR017441 GO:0005524
Pumo2g02514 553 MobiDBLite consensus disorder prediction 152 174 - -
Pumo2g02514 553 ProSiteProfiles Protein kinase domain profile. 200 486 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo2g02514 553 MobiDBLite consensus disorder prediction 523 553 - -
Pumo2g02514 553 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g02514 Pumo-Chr2 54770564 54776476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g02514 186 496 Glycoside Hydrolase AT3G07070 56.051 1.96e-115 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pumo2g02514 Pkinase 1.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g02514 - - gmx:100499647 880.937